Solimonas sp. K1W22B-7: D0B54_19870
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Entry
D0B54_19870 CDS
T05591
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sok
Solimonas sp. K1W22B-7
Pathway
sok03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sok00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D0B54_19870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sok03021
]
D0B54_19870
03400 DNA repair and recombination proteins [BR:
sok03400
]
D0B54_19870
Enzymes [BR:
sok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D0B54_19870
Transcription machinery [BR:
sok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D0B54_19870
DNA repair and recombination proteins [BR:
sok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D0B54_19870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
AXQ30803
UniProt:
A0A346N5G6
LinkDB
All DBs
Position
complement(4412479..4413459)
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AA seq
326 aa
AA seq
DB search
MQNVIADLLKPRLIEVEAVSTHRARVTLEPMERGFGHTLGNALRRILLSSIPGAAITEVQ
IDGVVHEYSAVEGVQEDVIDILLNIKNIAIRMHAREEATLRLEKSGKGAITAGDIQLDHD
VEIVNPELVLAHLTGGKLNMTLKVTRGRGYVPAASIVREEETRGIGVLKLDASYSPVRRV
SYAVERARVAQRTDLDKLILDVDTNGGIDAAEAVRLSARILRDQLAVFVDLEAEAAQAAA
TPGKKDLSPILFRPIDDLELTVRSANCLKAENVYYIGDLVQRTEMELMKTPNLGKKSLNE
IKEALKAHDLELGMKLDNWSSPKTPA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgtgattgccgacctgctcaagccgcgcctgatcgaggtggaagccgtttcc
acccatcgtgcgcgcgtcaccctcgaaccgatggagcgcggcttcggccacacgctgggc
aatgccctgcgccgcatcctgctgtcgtcgattccgggcgcagcgattaccgaagtgcag
atcgacggtgtcgtgcacgagtacagcgcggtcgaaggcgtccaggaagatgtcatcgac
atcctgctgaacatcaagaacatcgcgatccgcatgcacgcccgtgaagaagccaccctg
cgcctcgagaagtcgggcaagggtgccatcaccgccggcgacatccagctggaccacgac
gtcgagatcgtcaacccggaactggtgctcgcgcacctgaccggcggcaagctcaacatg
acgctgaaggtcacccgtggccgcggctacgtgccggctgccagcatcgtgcgtgaagag
gaaacccgcggtatcggcgtgctcaagctggatgccagctacagcccggttcgccgcgtc
agctacgccgtcgagcgcgcccgcgttgcgcagcgcaccgacctcgacaagctgatcctc
gacgtggacaccaacggcggcatcgatgctgccgaggccgtgcgcctgtcggcccgcatc
ctgcgcgaccagctcgccgtgttcgtcgacctggaagcggaagccgcccaggccgccgcc
actccgggcaagaaggacctgtcgccgatcctgttccgcccgatcgacgatctggaactc
accgtgcgttcggccaactgcctcaaggcggagaacgtctattacatcggcgatctggtg
cagcgcaccgagatggaactgatgaagacgccgaacctcggcaagaagtcgctcaacgaa
atcaaggaagcgctgaaggcgcatgacctcgagttgggcatgaagctcgacaactggtcg
tcgcccaagacgccggcctga
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