Solimonas sp. K1W22B-7: D0B54_21080
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Entry
D0B54_21080 CDS
T05591
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
sok
Solimonas sp. K1W22B-7
Pathway
sok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0B54_21080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sok03019
]
D0B54_21080
Enzymes [BR:
sok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D0B54_21080
Messenger RNA biogenesis [BR:
sok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0B54_21080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
PLAT
Motif
Other DBs
NCBI-ProteinID:
AXQ31020
UniProt:
A0A346N633
LinkDB
All DBs
Position
4671855..4673159
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AA seq
434 aa
AA seq
DB search
MQLQHLSEVTFESLPLHPQLKSGLAKLGYTHCTPIQAQTLPLALAGADLAGQAQTGTGKS
AAFLLATMNQLLTRPRREGADPGQPRALMMAPTRELAIQILKDAEQLGAETGLRMVVCYG
GAGYETQRTAIENGIDILIGTPGRLIDYFKQGVYKLDQIETLVLDEADRMFDLGFIVDIR
YMLRKLPPADQRRNYLFSATLSQRVLELAYEHMNSPQKIEIEPEQVTADRVRQGLIHVAN
DEKLAMLVGLLRHHDPFRTLVFLNTKRGAEEVEAALKLNGFEAATLSGDVAQTKRIKLLD
DFKEGRLPILVATDVAARGLHIPGVSHVINFDLPQDPEDYVHRIGRTARAGATGDAISFC
CETWVYSLPPIEKYIGAKIPLMQEAHDWLATDFVAPPRQPRRPFTGRSSSGRPGGGRSGG
GRPGGGRGGPGRRR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccagcacctaagcgaagtcactttcgagtccctgcccctgcatccgcagctc
aagtcagggcttgccaaactgggttatacgcactgtacgccgattcaggcgcagaccctg
cccctggccctggcgggggccgatctggccggccaggcccagaccggcaccggcaaatcg
gccgctttcctgctggcgacgatgaaccagctgctgacccgcccccgccgcgaaggcgcc
gaccccggccagccgcgcgcgctgatgatggcccccacccgcgagctggcgatccagatc
ctcaaggacgccgagcagctgggcgccgagaccggcctgcgcatggtggtctgctacggc
ggtgccggctacgaaacccagcgcacggcgatcgagaacggcatcgacatcctgatcggc
acccccggtcgcctgatcgactacttcaagcagggcgtctacaagctcgaccagatcgag
accctggtgctggacgaggccgatcgcatgttcgatctgggcttcatcgtcgacatccgc
tacatgctgcgcaagctgccgccggccgaccagcgccgcaactacctgttctcggccacc
ctgtcccagcgcgtgctggaactggcctacgagcacatgaattcgccgcagaagatcgag
atcgagcccgagcaggtcaccgccgaccgcgtgcgccagggcctgatccacgtcgccaat
gacgagaaactggccatgctggtgggcctgctgcgccaccacgaccccttccgcaccctg
gtgttcctcaataccaagcgcggcgccgaggaggtggaggccgccctcaagctcaacggc
ttcgaggccgccaccctgtccggcgacgtcgcccagaccaagcgcatcaagctgctggac
gacttcaaggaaggccgcctgccgatcctggtggccaccgacgtggccgcccgcggcctg
cacatccccggcgtgtcgcacgtcatcaacttcgacctgccgcaggacccggaggactac
gtccaccgtatcggccgcaccgcgcgcgccggcgccaccggcgacgccatctccttctgc
tgcgagacctgggtctactccctgccgccgatcgagaagtacatcggcgccaagatcccg
ctgatgcaggaggcccacgactggctggccaccgatttcgtcgccccgccgcgccagccg
cggcggcccttcaccggccgctcgagcagcggtcgtccgggcggcgggcgctccggcggc
ggacgcccggggggcggccggggcggccccggccggcgacgctga
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