Streptomyces okerensis: ACE1N8_03435
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Entry
ACE1N8_03435 CDS
T11145
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
soke Streptomyces okerensis
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soke03021
]
ACE1N8_03435
Transcription machinery [BR:
soke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACE1N8_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
HTH_38
MarR_2
MarR
Sigma70_ECF
GerE
HTH_27
Motif
Other DBs
NCBI-ProteinID:
XKV03300
LinkDB
All DBs
Position
789592..790476
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AA seq
294 aa
AA seq
DB search
MKTAVIRSQAQVLDEHADAGADGGEPLELDPRAVAPRDARKLSRQFFRRMAELEEGTYDY
QYARNTLIEMNMSLVRFAAGRFRGRGDDMDDIVQTGMIGLIKAIDRFELSREVEFTSFAL
PYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELASRLDREPTVAELATLMNITER
QVVEGQIAANGYNSSSLDAALTGDGPESGESVLADFIGVEEEGLRLVEDFHTLAPLMAEL
SERDREIIHLRFVEEATQAEIGERLGCSQMHVSRLIKRIIARLREGMLGELGCA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgccgtgatccggtcgcaggcgcaggtactcgatgagcacgccgacgccgga
gcggatggcggagaaccgctggaactggacccccgggccgtcgctccgcgcgacgccagg
aagttgtcccggcagttcttccgccgtatggcggagctggaggagggcacgtacgactac
cagtacgcacgcaacaccctcatcgagatgaacatgtccctcgtgcggttcgcggccgga
aggttccgcggccggggcgacgacatggacgacatcgtgcagaccggcatgatcggcctg
atcaaggcgatcgaccggttcgaactgtcgcgcgaggtggagttcacctccttcgcgctg
ccgtacatcgtgggtgagatcaagcggttcttccgtgacaccacgtgggccgtgcacgtg
ccgcggcggctgcaggagctgcgggtcgagctggccaaggcccgcgaggaactcgccagc
cggctggaccgggagcccacggtcgccgagctcgccacgctgatgaacatcaccgaacgg
caggtcgtcgaggggcagatcgccgcgaacgggtacaactcctcgtcgctggacgccgcc
ctcaccggtgacggcccggagagcggcgagtccgtcctcgcggacttcatcggggtcgag
gaggaggggctgcggctcgtcgaggacttccacacgctggccccgctgatggcggagctc
agcgagcgcgaccgggagatcattcatctgcggttcgtggaggaggccacccaggcggag
atcggtgagcgtctcggctgctcgcagatgcacgtgtcccgtctgatcaagcggatcatc
gcgcggctgcgcgagggcatgctgggcgaactcggctgcgcctga
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