Streptomyces okerensis: ACE1N8_07970
Help
Entry
ACE1N8_07970 CDS
T11145
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soke Streptomyces okerensis
Pathway
soke00040
Pentose and glucuronate interconversions
soke01100
Metabolic pathways
soke02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ACE1N8_07970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACE1N8_07970
Enzymes [BR:
soke01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ACE1N8_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
XKV04126
LinkDB
All DBs
Position
complement(1763256..1764590)
Genome browser
AA seq
444 aa
AA seq
DB search
MNRTGWHGHAIVRAASLAGCTALVLALTGPGAQAHSPSNHHRDAARQTLPAGDGWASHGT
GTTGGAAADREHVHTVSTWAEFRAALADGGDAPKIIKVRGTIDAVSEGCAALAAPGYDFG
AYLEKYAPETWGLEQDLTAEPDDSPEGLRRASADRQDAAIKVNVPSDTTIIGVGRNAGIK
GASLQIKGVDNVIVRNLTLESPVDCFPQWDPTDGSRGNWNSEYDTAVVHGSTHVWLDHNT
FTDGEHPDSAAPTHFGMLYQQHDGELDIVKGADYVTASWNVFTEHDKTILIGNSDSESTA
AGDRGRLKATFHHNLFSGLVERAPRVRFGQVDVYNNHFVAETGYSYSFGVGKESQLVAEH
NAFTLAKGIGPAKILKRWNDSPLTARHNLVNGKRVDLIAAHNAELPDTPLRSGAGWTPTL
RTAVHPAWAVPVLVGHGAGAGRIR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaactggatggcatgggcatgccatagtgagagccgcctcgctggccggctgt
accgccctcgtgctggcgctgaccggccccggagcccaggcccactccccgtcgaaccac
caccgcgacgccgcccggcagacgctgcccgcgggcgacggctgggcctcccacggcacc
ggcaccaccggaggagccgccgccgaccgcgagcacgtccacaccgtgagcacctgggcc
gagttcagggcggccctggccgacggcggtgacgcgccgaagatcatcaaggtgaggggg
accatcgacgcggtctccgagggctgcgccgcgctcgccgcgcccgggtacgacttcggt
gcctacctggagaagtacgcgccggagacctggggactggaacaggacctgaccgccgag
cccgacgacagcccggaggggctgcgcagggcgtccgccgaccggcaggacgccgccatc
aaggtgaacgtcccctccgacaccacgatcatcggcgtcggccggaacgccggcatcaag
ggcgccagcctgcagatcaagggcgtggacaacgtcatcgtccgcaacctcaccctcgag
agcccggtcgactgcttcccgcagtgggacccgaccgacggcagccggggcaactggaac
tccgagtacgacaccgccgtcgtccacggctccacccatgtgtggctggaccacaacacc
ttcaccgacggcgagcaccccgacagcgcggcgccgacccacttcggcatgctctaccag
cagcacgacggcgaactggacatcgtcaagggtgccgactacgtcaccgcctcctggaac
gtcttcaccgagcacgacaagacgatcctcatcggcaacagcgacagcgagtccaccgcc
gccggggaccgcggcagactgaaggcgaccttccaccacaacctgttctccggcctggtc
gagcgcgccccgcgcgtccgcttcggacaggtcgacgtgtacaacaaccacttcgtggcc
gagaccggctactcctacagcttcggcgtcggcaaggagtcccagctggtcgccgagcac
aacgcgttcaccctggcgaagggcatcggcccggccaagatcctcaagcggtggaacgac
tcgccgctcaccgcccggcacaacctcgtcaacggcaagcgggtcgacctgatcgccgcg
cacaacgcggaactccccgacacgcccctgaggtccggcgccggctggacccccaccctg
cgcaccgcggtccacccggcctgggcggtcccggtcctggtcgggcacggcgcgggagcc
ggccgcatccgctga
DBGET
integrated database retrieval system
