Streptomyces okerensis: ACE1N8_08980
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Entry
ACE1N8_08980 CDS
T11145
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
soke Streptomyces okerensis
Pathway
soke03030
DNA replication
soke03430
Mismatch repair
soke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACE1N8_08980 (dnaE)
03430 Mismatch repair
ACE1N8_08980 (dnaE)
03440 Homologous recombination
ACE1N8_08980 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soke03032
]
ACE1N8_08980 (dnaE)
03400 DNA repair and recombination proteins [BR:
soke03400
]
ACE1N8_08980 (dnaE)
Enzymes [BR:
soke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACE1N8_08980 (dnaE)
DNA replication proteins [BR:
soke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACE1N8_08980 (dnaE)
DNA repair and recombination proteins [BR:
soke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACE1N8_08980 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XKV04311
LinkDB
All DBs
Position
complement(1981233..1984772)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSAEKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNSTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKERYFLELMDHGIDIEHRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQQGCANTRLIAEMVDTTGMFEKRD
LMPKFDIPEGFTEVTWFQEEVRRGMERRFPGGVPEDRRKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPSHPRYNEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPLWTRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGVDLEMLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNGRQEITPIHKELEEPLQEVLSVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTGYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGTNVVESIIKSRKAKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDSMGHSRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEETSEPGFGL
DVTFTDDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGISQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSLECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMIPDLSNAGANAPVVLTIPATRVTPPMVSRLGEILTHHRGDSEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcgacgcctgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactccgcggagaaggcc
ggagtcacaccgatcatcgggatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgcgacgacgtctccggttccggtggc
tacacccacaagacgatgtgggccgtgaacagcaccggcctgcacaacctgttcaagctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atctcccagtggtccgaggggatcgtggcctccaccggctgcccctccggcgaggtccag
acccggctgcgcctcgggcacttcgacgaggcactcaaggccgccgccgactaccaggac
atcttcggcaaggagcgctacttcctggagctgatggaccacggcatcgacatcgagcac
cgggtccgcgacggcctgctggagatcggcaggaagctcggcatccccccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttccggttcgacggcaccggctactac
ctcaagtccaccgacgagatgtacgccatcgactcctcggacgcctggcagcagggctgc
gccaacacccggctgatcgccgagatggtcgacaccacgggcatgttcgaaaagcgcgac
ctgatgccgaagttcgacatcccggaggggttcacggaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgcttccccggcggcgtccccgaggaccgccgcaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtcggccccggccgagggtcc
gcggccggttcgatcgtggcctacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggtgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccctcgcacccgcgc
tacaacgaggccggcgagatccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagcccatcgtcgaccacgcaccgctgtggacacggcacaccgac
ggcgtgaccatcacccagtgggactacccccagtgcgagtcgctgggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcgtcgacctggagatgctcgccctcccgctggacgaccccaagaccttcgaa
ctgctctgccgcggagacaccctcggtgtcttccagttcgacggcggcccgatgcgctcg
ctgctccgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacatcaactacgcggagcgcaagaacggccgc
caggagatcacaccgatccacaaggaactggaggagccgctccaggaggtgctctcggtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgacgag
ctggcgaagaacttcgtcctcttccaggcgggcgcccggaagaacggctacagcgacgag
gcgatccaggcgctgtgggacgtgctggtccccttcgccggctacgcgttcaacaaggcc
cactccgccgcgtacggactggtgtcgtactggaccggctacctcaaggccaactacccg
gccgagtacatggccgcgctgctcacctccgtcaaggacgacaaggacaagtccgccgtc
tacctcaacgagtgccggcgcatgggcatcaaggtgctcccgcccaacgtcaacgagtcc
gagtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgcggtgcgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaagtcccgcaaggccaaggggaagtac
gcctccttcccggactacctcgacaaggtcgaggcggtcgtctgcaacaagcggaccacc
gagtcgctgatcaaggccggcgcgttcgactccatgggccacagccgcaagggcctcacc
gcgcagtacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggaggcatgggcgaggaggagaccagcgagcccggcttcggcctc
gacgtcaccttcaccgacgacgagtgggacaagacgtacctgctcgcgcaggagcgggag
atgctcggtctctacgtctccgaccacccgctgttcggcctcgagcacgtgctgtccgac
aaggccgacgcgggcatctcccagctcaccggcggcgacttcggcgacggcgcggtggtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtggaggacctcgcgggctccctcgagtgcatgttcttcccggcgacg
taccagctcgtctcgacccagctcgtcgaggacgccgtggtgttcgtcaagggccggctc
gacaagcgcgaggacgtgccgcggctggtggcgatggagctgatgatccccgacctgtcc
aacgcgggcgccaacgcgcccgtggtgctcaccatcccggcgacgcgcgtgaccccgccg
atggtcagccgtctcggtgagatcctcacgcaccacaggggcgacagcgaggtacggatc
aagctgcaggggccgacgaagacgacggtgctgcgtctggaccggcaccgggtcaagccc
gacccggccctcttcggcgacctgaaggtcctcctcggaccgtcctgcctggcgggttag
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