Streptomyces okerensis: ACE1N8_16910
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Entry
ACE1N8_16910 CDS
T11145
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
soke Streptomyces okerensis
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soke03021
]
ACE1N8_16910
Transcription machinery [BR:
soke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACE1N8_16910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
DUF7343
MarR
Motif
Other DBs
NCBI-ProteinID:
XKV05755
LinkDB
All DBs
Position
3748554..3749501
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AA seq
315 aa
AA seq
DB search
MSAEQGSSKVLTLAESETAPHALDALGPIDEGPATPVPELQDTTQLPETTELQPTAELPD
TAALDTRTLSRSLFLRLAALDENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIV
QVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTK
AGDELSQKLDRSPTVPELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLAD
RLGYEDTALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRL
LTRTLAQLREGLISD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcgcggagagcgaaacagctccc
catgctctcgacgcactcggccccatcgacgaaggcccggccacaccggttccggagctc
caggacacgacgcagctcccggagacgacggagcttcagcccacggcggagcttccggac
acggcggccctcgacacccgcaccctgtcccgttccctgttcctgcggctcgcagccctc
gacgagaacagcccggagcgtgcctacgtccgggacacactgatcgagctcaacctcccg
ctggtgcggtacgcggcggcgcggttccgctcgcgcaacgagccgatggaggacatcgtc
caggtcggcaccatcggcctgatcaaggcgatcgaccggttcgactgcgaacggggcgtg
gagttcccgacgttcgcgatgccgacggtggtcggcgagatcaagcggttcttccgcgac
acctcgtggtcggtgcgggtaccgcgccggctgcaggagctgcgcctggcgctgacgaag
gccggcgacgagctctcgcagaagctggaccgctccccgacggttcccgaactggccgcc
gtgctcggcgtgtcggaggaggacgtcgtcgacgggctcgcggtcggcaacgcgtacacg
gcgtcctcgctggactcccccgcccccgaggacgacggcggcgagggctcgctcgcggac
cgcctcggctacgaggacacggcactggagggcgtggagtaccgggagtcgctcaagccg
ctgctggccaagctgccgccccgggagcgccggatcatcatgctgcgcttcttcgccaac
atgacccagtcgcagatcggcgaggaggtcggcatctcccagatgcacgtctcgcggctg
ctcacgcggacgctcgcccagctgcgggagggcctcatctcggactga
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