Streptomyces okerensis: ACE1N8_17545
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Entry
ACE1N8_17545 CDS
T11145
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
soke Streptomyces okerensis
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soke03032
]
ACE1N8_17545 (gyrB)
03400 DNA repair and recombination proteins [BR:
soke03400
]
ACE1N8_17545 (gyrB)
Enzymes [BR:
soke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACE1N8_17545 (gyrB)
DNA replication proteins [BR:
soke03032
]
Prokaryotic type
DNA Topoisomerases
ACE1N8_17545 (gyrB)
DNA repair and recombination proteins [BR:
soke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACE1N8_17545 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
XKV05871
LinkDB
All DBs
Position
3887077..3889137
Genome browser
AA seq
686 aa
AA seq
DB search
MADSGNPNENIPSTDTGVNSEATTSGHEVTASYDASAITVLEGLDAVRKRPGMYIGSTGE
RGLHHLVQEVVDNSVDEALAGHADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPAVEV
VLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSSRVAVEIRTDGHRWTQDYKLGVPTAP
LAKHEAVEDSGTTVTFWADPDVFETTEYSFETLSRRFQEMAFLNKGLRINLTDERESAKA
TAGADEAGEDEKHEVKSVSYHYEGGIVDFVKYLNSRKGDPVHPTVIDLEAEDRERQLSLE
VAMQWNGGYNEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLRDKDDNLTGD
DIREGLTAIISVKLSEPQFEGQTKTKLGNTEVKTFVQKVVYEHLNDWLDRNPNEAADIIR
KGIAAATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPVKCEIFIVEGDSAGGSAK
SGRNPQYQAILPIRGKILNVEKARIDRILQNQEIQAMISAFGTGVHEDFDIEKLRYHKII
LMADADVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGKDDFEYAYSDRERD
ALIELGRNAGKRIREDSVQRFKGLGEMNAEELRITTMDQEHRVLGQVTLDDAAQADDLFS
VLMGEDVEARRAFIQRNAKDVRFLDI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggccgattccggcaaccccaacgagaacatcccgtccaccgacaccggcgtgaacagc
gaggcgaccacctcgggccacgaggtcaccgcctcgtacgacgccagtgcgatcaccgtc
ctcgagggtctggacgcggtccgcaagcgacccggtatgtacatcggttcaaccggtgag
cgagggctgcaccacctggtgcaggaagtcgtcgacaactccgtcgacgaggcgctggcc
ggtcacgcggacacgatcgacgtgacgatcctcgccgacggcggcgtccgggtcgtcgac
aacggccgcggcatcccggtgggcatcgtcccctccgagggcaagccggccgtcgaggtc
gtgctgacggtgctgcacgcgggcggcaagttcggcggcggcggctacgcggtctccggc
ggtctgcacggcgtgggtgtctccgtggtgaacgccctgtcgtccagggtcgccgtggag
atcaggacggacggccaccgctggacgcaggactacaagttgggcgtccccaccgcgccg
ctcgccaagcacgaggcggtcgaggactccggtacgacggtcacgttctgggccgacccc
gacgtcttcgagaccaccgagtactccttcgagaccctctcgcggcgtttccaggagatg
gcgttcctcaacaagggcctgaggatcaacctcaccgacgagcgcgagtcggcgaaggcc
accgccggtgcggacgaggcgggcgaggacgagaagcacgaggtcaagtccgtctcgtac
cactacgagggcggcatcgtcgacttcgtgaagtacctcaactcccgcaagggcgacccg
gtgcaccccaccgtgatcgacctggaggccgaggacagggagaggcagctctccctcgag
gtcgcgatgcagtggaacggcggctacaacgagggcgtgtactcgttcgccaacatcatc
cacacccacgagggcggtacgcacgaggagggcttccgcgcggcgctcacctcgctcatc
aacaagtacgcgcgggacaagaagctgctgcgcgacaaggacgacaacctcacgggtgac
gacatccgcgagggtctgaccgcgatcatctcggtcaagctgagcgagccgcagttcgag
ggccagaccaagaccaagctgggcaacaccgaggtgaagaccttcgtccagaaggtcgtc
tacgagcacctcaacgactggctggaccgcaaccccaacgaggccgcggacatcatccgc
aagggcatcgcggcggccaccgcgcgcgtggcggcccgcaaggcccgcgacctcacccgg
cgcaagggcctgctggagtcggcgtccctgccgggcaagctgtccgactgtcagtccaac
gaccccgtcaagtgcgagatcttcatcgtcgagggcgactccgccggcggttcggccaag
tccggccgcaacccgcagtaccaggcgatcctcccgatccgaggcaagatcctcaacgtc
gagaaggcgcgcatcgaccggatcctgcagaaccaggagatccaggcgatgatctccgcg
ttcggcaccggggtgcacgaggacttcgacatcgagaagctccgctatcacaagatcatc
ctgatggcggacgccgacgtcgacggccagcacatcaacaccctgctgctgacgttcctg
ttccgcttcatgcggccgctggtcgaggccgggcacgtgttcctctctcgtcccccgctc
tacaagatcaagtggggcaaggacgacttcgagtacgcgtactccgaccgtgagcgcgac
gcgctgatcgagttgggccgcaacgccggcaagcgcatccgtgaggactccgtgcagcgc
ttcaagggcctcggcgagatgaacgccgaggaactgcgcatcaccacgatggaccaggag
caccgcgtcctcggccaggtcaccctggacgacgccgcccaggccgacgacctgttctcg
gtcctgatgggcgaggacgtcgaggcgcgccgcgcgttcatccagcgcaacgccaaggac
gtccggttcctcgacatctga
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