Streptomyces okerensis: ACE1N8_20440
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Entry
ACE1N8_20440 CDS
T11145
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
soke Streptomyces okerensis
Pathway
soke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE1N8_20440 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soke03019
]
ACE1N8_20440 (recQ)
03400 DNA repair and recombination proteins [BR:
soke03400
]
ACE1N8_20440 (recQ)
Enzymes [BR:
soke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACE1N8_20440 (recQ)
Messenger RNA biogenesis [BR:
soke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE1N8_20440 (recQ)
DNA repair and recombination proteins [BR:
soke03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACE1N8_20440 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
XKV08798
LinkDB
All DBs
Position
4514035..4515999
Genome browser
AA seq
654 aa
AA seq
DB search
MQGTGGVAEMAVTDGEALAVLHRVFGYEAFRGEQEAVVEHVIAGGDAVVLMPTGGGKSLC
YQIPALVRPGTGVVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRTVEAEFLAGEL
DLLYLAPERLRMESSLDLLSRGKISVFAIDEAHCVSQWGHDFRPDYLTLSLLGERWPEVP
RLALTATATDATHREITDRLRMPEARHFVASFDRPNIQYRIVPKADPRKQLLSFLSEEHA
GDAGIVYCLSRNSVEKTAEFLSRNGIEAVPYHAGLDAGTRAAHQARFLREEGLVVVATIA
FGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQRKLIQSG
EGEEAFRRRSHQHLDSMLALCETVRCRRGQLLAYFGQEPAPAGCGNCDTCLVPPETWDGT
VAAQKVLSAVVRLQRERGQKFGAVQIVDILLGRRTAKVIQFDHDQLSVFGIGEDLSEAEW
RGVVRQLLAQGLLAVEGEYGTLVLTEESGAVLRREREVPLRKEPKKPVGSRTGSGRGERK
AKAAAAELPSELGPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATVWPTSVGELGGI
SGVGEKKLATYGEGVVAVLAGLTRPGDAGAGVTSDDPGRPDDWPEEEPEPDGWM
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggacgggcggtgtcgccgagatggcagtgacggatggtgaggcactggcggtg
ctgcaccgggtcttcgggtacgaggccttccgcggtgagcaggaagcggtggtcgagcat
gtgatcgcgggcggcgacgccgtcgtgctcatgccgaccggcggtggcaagtcgctgtgc
taccagattccggccctggtcagaccgggtacgggggtcgtcgtctcgccgctgatcgcc
ctgatgcaggaccaggtggacgcgctgcgggcactgggtgtgcgcgcggggttcatgaac
tccacgcaggacttcgacgagcggcggaccgtcgaggcggagttcctcgccggtgagctg
gacctgctgtacctcgctccggagcggctgcggatggagagcagcctggatctgctctcg
cgcggcaagatctccgtcttcgccatcgacgaggcgcactgcgtgtcccagtggggacac
gacttccggccggactacctcaccctctccctgctgggcgagcggtggccggaggtgccc
cggctcgcgctcacggcgaccgccacggacgccacgcaccgggagatcaccgaccggctc
cggatgccggaggcccggcatttcgtggccagcttcgaccggcccaacatccagtaccgg
atcgtgcccaaggccgacccccggaagcagctgctgagtttcctgagcgaggagcacgcg
ggcgacgcgggcatcgtgtactgcctgtcgcgcaactccgtggagaagacggcggagttc
ctctcgcgcaacggcatcgaggcggtgccgtaccacgccgggctcgacgcggggacgcgc
gccgcgcatcaggccaggttcctgcgggaggaggggctggtcgtggtggcgaccatcgcc
ttcggcatgggcatcgacaaaccggacgtcagattcgtcgcccacctcgacctgcccaag
tcggtcgagggctactaccaggagaccgggcgcgcggggcgtgacggactgccgtccacg
gcctggatggcgtacgggctgaacgacgtcatacagcagcggaagctgatccagtcgggg
gagggcgaggaggcgttccggcggcggtcccatcagcatctggactcgatgctggcgctg
tgcgagaccgtgcggtgccggcgcgggcagctcctcgcctacttcggccaggagccggcc
ccggcgggctgcggcaactgcgacacctgcctcgttccgccggagacctgggacgggacg
gtcgcggcgcagaaggtcctgtcggcggtggtgcggctgcagcgcgagcgcgggcagaag
ttcggcgcggtgcagatcgtggacatcctgctggggcggcgcacggccaaggtcatccag
ttcgaccacgaccagctctcggtgttcggcatcggtgaggacctgagcgaggccgagtgg
cggggcgtcgtccggcagttgctcgcccagggactgctcgcggtcgagggggagtacggc
acgctggtgctgaccgaggagagcggggcggtgctgcggcgggagcgggaggtgccgctg
cgcaaggagccgaagaagccggtcggctcgcggaccgggtccgggcggggcgagcgcaag
gccaaggccgccgccgccgagctgccctcggagctcgggccggcgttcgaggcgctgcgg
gcctggcgtgcggagcaggcgcgggagcagggggttccggcgtatgtcatcttccacgac
gcgacactccgggagatcgccacggtgtggcccacgtcggtgggcgagctcggagggatc
agcggggtgggcgagaagaagctggcgacgtacggggagggagtggtggcggtgctggcc
ggtctgacgcggccgggggacgcgggtgccggtgtgacatccgacgacccggggcgcccg
gacgactggcccgaggaggagccggagcccgacggctggatgtag
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