Streptomyces okerensis: ACE1N8_26435
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Entry
ACE1N8_26435 CDS
T11145
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
soke Streptomyces okerensis
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soke03009
]
ACE1N8_26435 (rimO)
Enzymes [BR:
soke01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACE1N8_26435 (rimO)
Ribosome biogenesis [BR:
soke03009
]
Prokaryotic type
ribosomal protein modification factors
ACE1N8_26435 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
XKV07484
LinkDB
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Position
5875051..5876526
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AA seq
491 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAGDADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQESAASVALPGHGPVDLPDGLAPASGPRAPLRRRLD
GAPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGLERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGESAADLAELERFLN
HARMDAIGVFGYSDEEGTEAATYDRKLDEEVVAERLARISRTAEELVSQRAEERVGETVH
VLVESVDEEEGVYGRAEHQAPETDGQVLLTSGEGLSVGRMVEAKVVGTEGVDLVAEPLFQ
GSLARGEEAGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtctggaggcggacggctggcagctcgtggaggacgccggg
gacgccgacgtcgccgtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaagggtcacgggagaacgcaggccgtcgtg
gcggtgggctgcatggcggagcggtacggcaaggagctcgccgaggcccttcccgaggcc
gacggagtgctcggcttcgacgactacaccgacatctccgaccgcctccagaccattctg
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggccgagcggcaggagtccgccgcctccgtcgcacttcccggacacgggccggtggac
ctgcccgacgggctcgccccggcctccggaccccgtgcgcccctgcgccgccggctggac
ggcgccccggtcgcctcggtgaagctcgcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcccgccggcccagcgacgtgctgaacgag
acccgctggctggccgaacagggcgtgaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctgggcgacatccgcctgctggagtccctgctgcccgaactcgcg
gaggtcgacggcctcgagcgggtgcgggtcagctacctccagccggccgagatgcggccc
ggtctgatcgacgtgctgacctccaccccgaaggtcgccccctacttcgacctgtccttc
cagcactccgcgcccgacgtgctgcgcgcgatgcgccgcttcggcgacaccgaccggttc
ctggaactgctcgacaccatccggagcaaggcgccccaggccggcgtgcgctccaacttc
atcgtcggcttccccggcgagtccgcggccgacctcgccgagctggagcggttcctgaac
cacgcgcggatggacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacgtacgaccgcaagctggacgaggaggtcgtcgccgagcggctggcccggatctcg
cggacggccgaggaactcgtctcgcagcgcgccgaggagcgggtcggcgagaccgtgcac
gtgctggtggagtccgtggacgaggaggagggtgtgtacggccgggccgagcaccaggct
cccgagacggacggccaggtgctgctcacgagcggcgagggcctgagcgtcggtcgtatg
gtcgaggcgaaggtggtcggtacggaaggtgtcgacctggtggccgagccgctgttccag
ggttcgctcgcgcgtggtgaggaggcgggcagatga
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