Saccharolobus solfataricus 98/2: Ssol_1156
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Entry
Ssol_1156 CDS
T02126
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sol
Saccharolobus solfataricus 98/2
Pathway
sol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Ssol_1156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sol03019
]
Ssol_1156
03009 Ribosome biogenesis [BR:
sol03009
]
Ssol_1156
04131 Membrane trafficking [BR:
sol04131
]
Ssol_1156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sol04147
]
Ssol_1156
Messenger RNA biogenesis [BR:
sol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Ssol_1156
Ribosome biogenesis [BR:
sol03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Ssol_1156
Membrane trafficking [BR:
sol04131
]
SNARE
SNARE associated proteins
Others
Ssol_1156
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Ssol_1156
Exosome [BR:
sol04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ssol_1156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
TIP49
AAA_33
AAA_14
IstB_IS21
Vps4_C
AAA_28
nSTAND3
AAA_18
Mg_chelatase
RNA_helicase
ABC_tran
ATPase_2
Parvo_NS1
AAA_24
Sigma54_activat
NPHP3_N
AAA_3
AAA_17
TsaE
Zeta_toxin
AAA_7
AAA_lid_PRS2_C
ATP-synt_ab
NACHT
DUF815
NB-ARC
ATPase
AAA_25
Bac_DnaA
PhoH
SPT16
Motif
Other DBs
NCBI-ProteinID:
ACX91394
UniProt:
D0KRM5
LinkDB
All DBs
Position
1074625..1076934
Genome browser
AA seq
769 aa
AA seq
DB search
MSASSGEEQKPQRKELILRVMEARQKDVGRGKVRIDIDLLSQIDVSPGDVVEIEGTRKTA
ALAWPLSPEDTTTGEKDIIRMDGITRKNAGVSIGDKVIVRKAIVKPASTVKLAPSNFSIT
VDPGFISYVKKRLKEFPLVEGDTVLIPVLGQAIPFTVVQVKPAGIVLVNDDTIISISDKP
VEPSRYPRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKT
LLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPK
RDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLP
DKQGRLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDL
NQDKIPPEILESMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEV
VEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWV
GESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISYDSGVTERIVNQLLAEMDGIEKL
ENVVVIAATNRPDILDPALLRPGRFEKLIYVPPPDKRARTEILKVHTRNIALGEDISLED
VAEKTEGYTGADLAALVREATMRAIRESMKICIDKTNENCKPTDAECRDKTMKECMKVNG
VKVSLRHFEEAMRKVKPSVTQDMLQFYQNWVEKARQQLPKTTVKPSTYA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctagttctggagaggaacagaagccgcaaagaaaggagttaatacttagagta
atggaagcaagacaaaaagatgtcgggagagggaaagtaagaattgatattgatttactc
tcacaaattgatgtaagcccgggtgatgtagtcgaaattgaaggaaccagaaagaccgct
gcgcttgcatggcctttgtcgccagaagatacaacaactggagaaaaagacataataaga
atggatggaattactaggaaaaacgctggtgtctcgattggagataaggttatagtacgg
aaagcaattgtaaaaccagccagcacagtaaaattagcaccatctaacttctcaattacc
gtagatccaggtttcatcagttatgttaagaaacgattaaaagaattccccctagttgaa
ggggatacagtattaattccagttctaggacaagctataccgtttactgtggttcaagtc
aaacctgcaggtatagttctagtaaatgacgatacaataataagcatatctgataagcca
gtagaaccttccagatatcccagagttacctatgaagatataggtggaatgaaaaatatt
atagaaaaagttagagagttagtagaactacccttaagacatccagaactgttcaagaga
ttaggaatagaaccgcctaagggcatactactatatggcccacctggagttggaaagacg
ttactcgctaaagctatagctaacgagactgatgcctacttcacttcaattaatggacca
gaaataatgagtaaattctatggggaaagtgagcaaagattaagagaaatatttgaagat
gccaaaaaacatgctcctgcgataatattcgtagatgaaatagacgcaatagcaccgaaa
agagacgaagtaataggagaagtagaaagaagagttgttgcacagttactcaccctaatg
gatggacttgaaaatagaggaaacgtgatagttatagcagctaccaatagacctagtgct
gttgatccagcattaagaagaccgggaagatttgatagggaaatagaaataccattacca
gataagcaaggaagattagaaatattacaaatccacacaaggaatatgccattatctaag
gatgttgacctagaaaagcttgcagatatgacacacggatatactggtgctgatttgtct
gcattagtaagagaagctgcaatgaattccttaagaagatatttaccaaagatagatttg
aaccaagataagatacctccagagatattagagtctatggaagttaagatggaggatttc
ataaatgcattcaaggaaatagtaccgagtggcttaagggaaatttacatagaagttcct
gaggttaaatggacagatataggtggacttgaagaaataaaagaagagctaaaagaagta
gttgaatatcccttgaaatactcagagctataccaaaactctggtatagagccacctaag
ggtatattgttatttggtccacccggaactggaaagacaatgctagcgaaggctgtggcg
actgaaagcggagcaaatttcatagcagtgagagggccagaaatattatccaaatgggta
ggtgaaagtgaaaaagcagttagagaaatatttagaaaagctagaatgtatgctccagct
gtaatattctttgacgaaatagattcaatagcgccaataaggggaatttcttatgattcc
ggagtaacagagagaatagtaaatcagctattagcggaaatggatggaatagaaaaatta
gagaatgtggtagttatagctgcaactaatagaccagatatcttagatccagcattgcta
agacccggtaggtttgagaaattaatctatgtacccccaccagataagagggcaaggaca
gaaatattaaaggtgcatactaggaacatagcgctaggtgaggatatcagcttagaggac
gtagctgaaaagactgaaggctacaccggagctgacttagcagcgttagtaagagaagct
acaatgagagctataagagagagcatgaaaatatgtatagataagactaacgagaattgt
aaacctacagatgctgaatgcagagataagactatgaaagaatgtatgaaggttaacggg
gttaaggtttccctaagacatttcgaagaggctatgaggaaagttaaaccatcagttaca
caagatatgttgcaattctatcaaaattgggtggaaaaagctaggcaacaattgccaaaa
actactgttaaaccaagtacatatgcgtga
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