Saccharolobus solfataricus 98/2: Ssol_1288
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Entry
Ssol_1288 CDS
T02126
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sol
Saccharolobus solfataricus 98/2
Pathway
sol03022
Basal transcription factors
sol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ssol_1288
09124 Replication and repair
03420 Nucleotide excision repair
Ssol_1288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sol03021
]
Ssol_1288
03036 Chromosome and associated proteins [BR:
sol03036
]
Ssol_1288
03400 DNA repair and recombination proteins [BR:
sol03400
]
Ssol_1288
Enzymes [BR:
sol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Ssol_1288
Transcription machinery [BR:
sol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Ssol_1288
Chromosome and associated proteins [BR:
sol03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Ssol_1288
DNA repair and recombination proteins [BR:
sol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Ssol_1288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
AAA_34
DpaA_N
nSTAND3
Stealth_CR2
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACX91524
UniProt:
D0KS05
LinkDB
All DBs
Position
1192823..1194475
Genome browser
AA seq
550 aa
AA seq
DB search
MELREWQSKIAEKIVEALRNNFLVSLQAPTGSGKTLFALYTALKVKPKVAFVVRTHNEFF
PVYRELSLHFKDKKYGFLVGKSSACVFSSSDVDAQDIYCNGCEIFNASAVTVTDSPKVSL
NKLKEEGKKLGFCPYYSLLETIKTADVILLTYPYLFIPWLRESLDINWEDYVVIVDEAHN
IENVSNIEEKKLNKRIIEMAISQSHSQNVKVILERLKENVEKAVYSEDKYILIEKDKLDN
ILPSNEEIEILSEEYDEIRKIMIKNKTVSRNYLGSILRFFDLVNDEGIRVFSYSGSLIAK
YIIPSYFTDILNDEKITYMLMSGTMQPLDYLRNIIGIKRKILYIDAEKVMKKRLTGTYEC
LISIDVTTTYSLRSEQMARKYASYLLKIFYNSRRHVLAIFPSYEFMRIVSKFLNIRYLAE
DTETSIEEIMSNLKKEKTIIMGIARGKLAEGIEIVENGSSLISDVAMVGIPYPPIDDYLK
IRVEEISKILKKDISNELISIQALIAVKQSIGRAIRGPTDNATIWLLDKRYDSLWWKKEL
NCLNARKIKL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaacttagagagtggcaaagcaaaatagctgagaaaattgtagaagcattaagaaat
aattttttagtttcattgcaagctcctacgggtagtggtaagactttatttgcactttac
actgctcttaaggttaagccaaaagtagcgtttgttgtaagaactcataacgaatttttc
ccagtttacagagaactatctttacactttaaggataaaaaatacggatttttagtaggt
aaatcctctgcgtgtgtttttagttcatctgacgttgatgctcaagatatatattgtaat
ggatgtgaaatttttaacgcgtccgcagttaccgtaactgattcgccaaaggtaagtctg
aataagctaaaggaggagggtaaaaaattaggattttgcccttattattctcttctggag
accataaaaaccgctgatgtgatattactcacatatccttatctgtttataccttggctt
agagaatctttagatattaattgggaggactatgttgttatagtagacgaggctcataat
atagagaacgtttctaatatagaagagaaaaaactaaacaaaagaattatagagatggca
atttcccaatctcactcacaaaatgtgaaagtaatattggaaagacttaaggaaaatgtt
gaaaaggcagtttattcagaggataaatatatacttattgaaaaggataaattagacaat
atactaccttctaatgaagaaatcgagattttatcggaagaatatgatgaaattaggaag
attatgataaaaaataagacggtaagtaggaattatctcggatcgattttgaggtttttt
gatttagttaatgatgaaggaattagagttttttcatattctggttccttgattgcaaaa
tatataataccctcttactttactgatatacttaacgatgagaaaattacgtatatgctg
atgtccggtactatgcaacccttagattatcttagaaatattataggaattaaaaggaaa
atattatatattgatgcagaaaaggttatgaaaaaaagattaactgggacatatgagtgt
cttatatctattgatgttacaactacttatagtttaagatcggaacaaatggcacgtaaa
tatgcatcatatttactaaaaattttctataattctagaagacatgttctagctatattt
cctagctatgaatttatgagaatagtatctaaatttctaaatataagatatttggcagaa
gatacagaaactagtatcgaagagataatgagcaatctgaaaaaagaaaaaacaattatc
atgggtatagcaaggggtaagttagctgaaggaattgaaatagttgaaaatggatctagt
ctaatatcagatgtggcaatggtaggtatcccttatcctccaatagatgattacttaaag
atacgagttgaggagatatcaaaaatcttgaaaaaggatattagtaacgaattaatcagt
atacaagcattaattgctgtaaaacaatccataggtagggccataaggggtccaacggat
aatgcaactatatggcttcttgataaaagatatgatagtctatggtggaagaaagaactt
aattgcttgaatgcaaggaaaattaaactgtga
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