Saccharolobus solfataricus 98/2: Ssol_1793
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Entry
Ssol_1793 CDS
T02126
Name
(GenBank) K-like, type 1, subgroup
KO
K03679
exosome complex component RRP4
Organism
sol
Saccharolobus solfataricus 98/2
Pathway
sol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ssol_1793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sol03019
]
Ssol_1793
Messenger RNA biogenesis [BR:
sol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Ssol_1793
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Ssol_1793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N_2
KH_6
S1_RRP4
RRP40_S1
KH_1
S1
Motif
Other DBs
NCBI-ProteinID:
ACX92009
UniProt:
D0KTE0
LinkDB
All DBs
Position
complement(1598691..1599434)
Genome browser
AA seq
247 aa
AA seq
DB search
MSQSQKIVLQPRSIVVPGELLAEGEFQIPWSPYILKINSKYYSTVVGLFDVKDTQFEVIP
LEGSFYYPKINDIVIGLVEDVEIYGWVVDIKAPYKAYLPASNLLGRSINVGEDLRRYLDV
GDYVIARIENFDRSIDPVLSVKGKDLGRVSNGIVIDIMPVKVPRVIGKNKSMYETLTSKS
GCSIFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFIEEKLGERNASS
GETKTNS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtcccagaaaattgtcttacagccaaggtcaatagtagttcctggtgagtta
ttagcagaaggcgaatttcagattccttggtctccttatatactaaagattaacagcaaa
tactactccacagttgttgggctttttgatgtaaaagatactcaatttgaggtaattccc
ttggaaggctcgttttattatcctaagattaatgacatagtaataggtttagtggaggac
gttgagatctatggctgggtggttgatataaaagcaccttataaggcttacttaccagct
tcaaatcttttagggaggtctattaatgttggagaggacttaaggagatatttagatgta
ggtgactatgttatagctagaattgaaaattttgataggtcaatagatcccgtcttatcc
gttaaaggcaaggatctagggcgtgtaagtaatggtatagtcatcgatataatgccagtt
aaagtcccacgcgttataggtaagaataaaagtatgtatgagaccttaacctcaaaaagc
ggatgtagtatttttgttgctaacaatggtaggatatgggctacttgcccttcacgcttt
tctgaagaaattttaattgaggcaattaggaagatcgagaatgagtcacatataaaagga
ttaacagatagaataaaacaattcattgaggaaaaattaggtgagagaaatgcttcaagt
ggagagaccaaaactaattcttga
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