Solidesulfovibrio sp. DCME: ACP59X_04945
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Entry
ACP59X_04945 CDS
T11445
Symbol
recD2
Name
(GenBank) SF1B family DNA helicase RecD2
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
soli Solidesulfovibrio sp. DCME
Pathway
soli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACP59X_04945 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soli03400
]
ACP59X_04945 (recD2)
Enzymes [BR:
soli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACP59X_04945 (recD2)
DNA repair and recombination proteins [BR:
soli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACP59X_04945 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
PIF1
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
nSTAND3
HHH
PhoH
SLFN-g3_helicase
AAA_28
AAA_16
ABC_tran
NPHP3_N
DEAD
AAA
RsgA_GTPase
Mg_chelatase
T2SSE
AAA_29
ATPase_2
TsaE
NB-ARC
AAA_23
Pox_A32
Rad17
AAA_24
HHH_2
Zeta_toxin
TrwB_AAD_bind
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
XSC51932
LinkDB
All DBs
Position
1155820..1157991
Genome browser
AA seq
723 aa
AA seq
DB search
MDLADLQGQIERVTFTSEESGYTIAKVKVYGRRELVTVVGNMVCPTPGEIIKMKGEWGNH
PKFGEQFKLTYYKTTTPASVHGIEKYLGSGLIKGIGPVMAKRIVKLFGEATLDVIEADIQ
KLVEVPGIGSKRVGMIGLAWEEQKEIRSVMLFLQTHGVSSGYATKIYKQYKNESIAVVQE
NPYRLAHDIFGIGFVTADKIAQKLGFDKNSPLRAEAGILYVLHQLSDEGHVFYPREPLIE
KAIEILEVEAGVLTDALGRLAREQKIVAETLDSLSGPVEAVYLAKYHLSEKQVTARLKAL
QAAAKGVRAIDAVKAVEWVQEKLSMTLAEKQVEAVKAAATSKVLVITGGPGTGKTTIIRA
ILKIFSAITKHILLAAPTGRAAKRMSEATGHEAKTLHRLLEYSMQKGGFQKNEDHPLDCE
LIVVDEASMIDLILMHHLLKAIPKPATLILVGDVDQLPSVGAGNVLKDVIASGAIPVVEL
NEIFRQAQESSIIVNAHRINKGVMPDLRPKMEGDDFYFVQEDEPDRALQRIIHLVKERIP
KKFGLDPIDDIQVLTPMNRGVVGTANLNTALQEALNPRGEELARGGRTFRVGDKVMQIKN
DYDREVFNGDIGRIARIDSEEQEVVLAIDGREVKYEYSDLDELVLAYGVSIHKSQGSEYP
AIVIPIMMQHYIMLQRNLIYTGITRGRKLVVLVGQKKALGMAVRNNKTSFRNTYLDKRIK
LGK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatctagcagacctccagggtcagatagaacgggtcacttttaccagcgaagagagc
ggttacaccattgccaaagtcaaggtgtatggccgccgtgaactcgtaaccgtcgttggc
aatatggtgtgccccaccccaggcgagatcatcaagatgaagggtgaatggggtaaccac
ccgaagttcggtgagcaattcaaactcacatactacaagacgactacccccgcctctgtc
cacggaatcgaaaaataccttgggtcgggcctgatcaagggcatcggaccggtcatggcc
aagcgcatcgtcaagctgttcggggaggccacactggatgtcattgaggcggacatccag
aagcttgttgaggtgccgggcatcggctccaaacgggttggcatgatcggtctggcctgg
gaggagcagaaagaaatccgctccgtaatgctgtttctccagacccatggcgtcagctcc
ggatacgccacaaaaatctacaagcagtacaaaaacgaatccattgccgtcgtccaggag
aatccttaccggctggcccacgatattttcggtatcggcttcgtcacagcggacaaaata
gcgcagaagcttgggttcgacaaaaactcgccactccgggccgaagccggcattctctac
gtccttcaccagttgtccgacgaaggacacgttttttatccccgggaaccattaatcgag
aaggccattgagattctggaagtggaggctggagttctgactgatgccctcggtcgtctg
gcaagagagcaaaagattgtcgctgaaacccttgatagcctaagtgggccggttgaagcc
gtctatcttgccaaataccatctttccgaaaagcaggtgacggcgaggctcaaggcgctt
caggctgccgccaagggtgtccgcgccattgacgccgtgaaggcagtggaatgggtccag
gaaaagctgtccatgaccttggccgagaagcaggtggaagcggtgaaggccgccgccacg
agcaaagtcctggtcattactggcgggccggggactggcaaaacgacaattatccgggcc
atcctcaagattttttccgcgattaccaagcacatcctcctggcggcaccgacaggccgt
gcagctaagcgcatgtccgaagccaccggtcatgaagccaagacgctccaccggttgctt
gagtactccatgcagaaaggcggcttccagaagaacgaggaccatcccctcgattgtgag
ctgattgtcgtggacgaagcgtccatgattgacctcattctgatgcaccatctgctcaag
gccatcccgaagccggccactctgatcctggtgggtgacgtggaccagctgccttcggtt
ggtgccggcaacgtgctcaaggacgtgattgcttctggagccattccggtcgtggagctg
aatgaaattttccggcaggcccaagaatcctccattatcgtcaacgcccacaggatcaac
aagggcgtcatgcctgacctgcggccgaaaatggagggtgatgatttttatttcgtgcaa
gaggatgaaccagaccgagcgctgcagcgaatcatccatttggtcaaggagcggattccg
aaaaagtttggcctggaccccatcgacgacatccaggtattaacccccatgaaccgaggc
gttgtcgggaccgcgaaccttaacactgctcttcaggaagcactcaatcctcgaggtgag
gaactcgcccgtggaggaaggacgttccgagtcggcgacaaggtcatgcagatcaaaaat
gactatgaccgggaagtttttaatggtgacatcgggcggattgcgagaattgattcagaa
gaacaagaagttgtcctagccattgatggccgggaagttaaatatgaatattctgatcta
gatgagttggtacttgcttatggcgtgtcgattcacaaatctcaggggtcagagtatccg
gcgattgttattcctattatgatgcagcactatataatgctacagagaaatctaatatac
actggaattactcgggggcggaagctcgttgtcctcgttggccaaaagaaagcgcttggt
atggccgtaagaaataataagacgtcatttaggaacacctatttagacaaaagaattaag
ctcggaaagtaa
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