Solidesulfovibrio sp. DCME: ACP59X_11560
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Entry
ACP59X_11560 CDS
T11445
Symbol
recD2
Name
(GenBank) SF1B family DNA helicase RecD2
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
soli Solidesulfovibrio sp. DCME
Pathway
soli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACP59X_11560 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soli03400
]
ACP59X_11560 (recD2)
Enzymes [BR:
soli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACP59X_11560 (recD2)
DNA repair and recombination proteins [BR:
soli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACP59X_11560 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_22
SLFN-g3_helicase
NPHP3_N
UvrD-helicase
nSTAND3
HTH_IclR
AAA_16
PIF1
AAA_28
AAA
NAT10_TcmA_helicase
NTPase_1
RNA_pol_A_CTD
HEAT_GCN1
TsaE
HHH_2
AAA_18
Zeta_toxin
AAA_14
Motif
Other DBs
NCBI-ProteinID:
XSC53209
LinkDB
All DBs
Position
2662559..2664751
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AA seq
730 aa
AA seq
DB search
MAVAAQPTELSAEVQTVTFFNEGTNYCIAKVRSKDEPGPFSIVGHLGKLTPGEMLRVTGT
WATHPKYGRQFQVTACAREMPATVNGIRRYLASGMIKGVGGVLATRMVDAFGEKVLEILD
KEPEKLLAVEGLGKKKLKEIVESWTAQHEVRSLMLFLQTHEIATTHAGKIFKLYGNAAEA
RIRANPYELAYEIRGIAFKTADAMALRLGFAPDSPERVQAALVYMLFTMGEQGHLFVPRD
VLFEKTAAMIEGVSIGRLDEALGQLETLKRVKVEALPAQDIEAAVYLRHFYALEVEIARR
LHDLASHPGADLRGKVEKLLPALESEARLQLSPEQRQAAVDACAEKVFVITGGPGTGKTT
ITRMVVAALDKLSLKVKLAAPTGRAAKRLAEATGFPAATLHRLLQSTPDGSFALCEDNKL
KTDVLLVDEVSMLDARLCAHMLRALPFTARLILVGDADQLPSVGAGDVLADVLGSQAVGS
ARLTQIFRQAKQSMIVVNAHRVNQGQFPLTCDRQPPEADFFWVEQDDPASVRDMIATLVT
ERIPRVYGLDPLRDVQVLSPMHKGEAGTQSLNEALRERLNPKGPEITRGTTRFRLHDRVL
QTKNDYEKDVFNGDLGHIVEVDPSEGELVVSFDGRNVSYDRTELDELAPAYAVSIHKSQG
SEYPAVVVPILTQHYVMLRRNLIYTALTRARRLAVLIGSKRAMLLGLRNAGGDRRYTHLN
HRLRELFNAL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgcggcgcaacccaccgaactgtccgccgaggtgcagaccgtcaccttcttc
aacgaaggcacgaactactgcatcgccaaggtgcgctccaaggacgagcccggccccttt
tccatcgtcggccacctgggcaagctcacgcccggggaaatgctgcgcgtaaccggcacc
tgggccacccaccccaagtacggccgccagttccaggtgacggcctgcgcccgggagatg
ccggccaccgtcaacggcatccgccgctacctggcctcgggcatgatcaagggcgtgggc
ggcgtgctggccacgcgcatggtcgacgccttcggcgaaaaggtcctggagatcctcgac
aaggagccggaaaagctcctggccgtggaaggcctgggcaaaaaaaagctcaaggagatc
gtggaatcgtggacggcccagcacgaggtccgttcgttgatgctgtttctgcagacccac
gagatcgcaacgacccacgccggcaaaatcttcaagctctacggcaacgccgccgaggcg
cgcatccgggccaacccttacgagctggcctacgagatccgcggcatcgcgtttaagacc
gccgacgccatggccctgcgcctggggttcgccccggacagccccgagcgggtgcaggcc
gccctggtctacatgctgttcaccatgggcgagcaggggcatttgttcgtgccccgcgac
gtgctgtttgaaaaaacggcggccatgatcgaaggcgtctccatcggccgcctcgacgag
gccctgggccaactcgaaaccctcaaacgggtcaaggtcgaggccctgccggcccaggat
atcgaggccgccgtctacctgcgccatttctacgccctggaagtcgagatcgccaggcgc
ctgcacgacctggccagccatcccggggccgacctgcggggcaaggtggaaaagctcctg
ccggcgctcgaatccgaggcccgcctccagctttcccccgagcagcgccaagccgccgtg
gacgcctgcgccgagaaggtcttcgtcatcaccggcggcccgggcaccggcaagaccacc
atcacccgcatggtggtggccgcccttgacaagctctcgctaaaagtcaaacttgccgcg
cccacgggccgggcggccaagcggctggccgaggccacgggcttcccggccgccacgctg
caccgcttgctgcagtccacgccggacggctcgtttgccctgtgcgaggacaacaagctc
aagaccgacgtgctgcttgtcgacgaggtcagcatgctcgacgccaggctttgcgcccac
atgctgcgggccttgccgttcacggcccgcctgattttggtcggtgacgccgaccagttg
ccgtcggtcggcgccggcgacgtcctggccgacgtgctcggcagccaggccgtgggcagc
gcccggctgacccagatttttcgccaggccaagcagagcatgatcgtggtcaacgcccac
cgcgtcaaccagggccagtttcccctgacctgcgaccggcagccgccggaagcggatttt
ttctgggtggagcaggacgacccggccagcgtgcgggacatgatcgccacgctggtcacc
gagcgcatcccccgggtctacggcctggaccccctgcgcgacgtgcaggtgctctcgccc
atgcacaagggcgaggccggcacccagtccctcaatgaggccctgcgtgagcgccttaat
cccaaggggccggaaatcacgcgcggcacgacgcgctttcgcctgcacgaccgggtgttg
cagacgaaaaacgattatgaaaaggacgtcttcaacggcgacctgggccatatcgtggag
gtcgacccgtcggaaggggagctggtggtttccttcgacgggcgcaacgtcagctacgac
cgcaccgaactcgacgaactggccccggcctatgccgtgagcatccacaaatcccagggg
agcgagtacccggccgtggtcgtccccatattgacacagcattacgtcatgttgcgccga
aacctcatctataccgccctgacgcgggcccggcggctggccgtgctgatcggcagcaag
cgggccatgctgctggggctgcgcaatgccggcggcgacaggcgctacacccatctcaac
catcggcttcgggagcttttcaatgcgctgtaa
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