Solidesulfovibrio sp. DCME: ACP59X_11780
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Entry
ACP59X_11780 CDS
T11445
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
soli Solidesulfovibrio sp. DCME
Pathway
soli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACP59X_11780 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soli03400
]
ACP59X_11780 (uvrB)
DNA repair and recombination proteins [BR:
soli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACP59X_11780 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACP59X_11780 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
CpgS_C
AAA_16
nSTAND_NTPase5
AAA_5
CnbZ
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
XSC48684
LinkDB
All DBs
Position
2706453..2708507
Genome browser
AA seq
684 aa
AA seq
DB search
MLFQLESEYTPQGDQPRAIDEMAANLSQGLPSQVLLGATGTGKTFSMAQVVARLNRPALV
MAPNKTLAAQLYSEFKGLFPKNAVEYFVSYYDYYQPEAYLPRTDTYIEKDASINDDIDKL
RHAATHSLLTRRDVLIVASVSCIYGLGSRDYYERMVLSLTVGAKTGMEAVLARLVEIQYE
RNDYDFHRGVFRVRGDVIELIPAYSRDRALRLEFFDDELEAILETDPLTGEVLGSMEKAI
VFPASHYVSDRDNLNRAVADIREELRLRLTELKAANDLLAAQRLEMRTMQDLEMIEELGY
CNGIENYSRHLDGRQAGQPPYTLLDYFPEDFILFVDESHITVPQIGGMYAGDRSRKQTLV
DYGFRLPSALDNRPLNFEEFLGRIGQAVYVSATPGDWEIQRSQGVVVEQIIRPTGLLDPE
VEVRPTKGQVDDLMAECRLRAAAGERVLVTTLTKRMAEELNQYFNAMGVRARYLHSDIDT
LERVAIIKALRQGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSVRSLIQTFGRA
ARNVGGRVILYADVVTGSMRLAMEETARRREKQEAFNAEAGIVPRTIIKGMDSVLDSLYG
QGGQAGAGRASAGYDSGGPARPGAAASAREELADYGDMSKKALEKKIKMLEREMREAAKA
LEFEKAAQLRDQVAALRARLLEMG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcttttccagcttgaatccgaatacaccccccagggcgaccagccccgggccatcgac
gaaatggccgccaacctgtcccaggggctgccgagccaggtgctgctcggggccaccggc
acgggcaagaccttttccatggcccaggtggtggccaggctcaaccggccggccctggtc
atggcccccaacaagaccctggccgcgcagctctacagcgaattcaaggggctgttcccc
aaaaacgccgtggaatacttcgtcagctactacgactactaccagccggaagcctacctg
ccgcgcacggacacctacatcgagaaagacgcctccataaacgacgacatcgacaagctg
cgccacgccgccacccattcactgctcacccgccgcgacgtgctcatcgtggcctcggtt
tcctgcatctacggcctgggctcgcgcgactactacgaacgcatggtcctttcgctcacc
gtgggcgcgaagaccggcatggaggcggtgctggcgaggctggtggagatccagtacgag
cgcaacgactacgatttccaccggggcgtgttccgggtgcgcggcgacgtcatcgagctc
atcccggcctacagccgcgatcgggccctgcgcctggaatttttcgacgacgagctcgaa
gccatactggagaccgacccgctgaccggcgaggtcctgggctccatggaaaaggccatc
gtcttcccggccagccactacgtctccgaccgcgacaacctgaaccgggccgtggccgac
atccgcgaggaactgcgcctgcgcctgaccgaactcaaggcggcgaacgacctgctggcc
gcccagcgcctggaaatgcgcaccatgcaggacctggagatgatcgaggagctcggctac
tgcaacggcatcgagaactactcccgccacctcgacgggaggcaggccggccagccgccc
tatacgctgctcgactacttccccgaggacttcattctgttcgtggacgagtcccacatc
accgtgccgcagatcggcggcatgtacgccggcgaccgctcgcgcaagcagacgctcgtc
gactacggcttccgcctgccctcggccctggacaaccggccgctcaatttcgaggagttc
ctgggccgcatcggccaggccgtctacgtctcggccacgcccggggactgggagatacaa
cgcagccagggtgtggtggtggagcagatcatccgccccaccggcctgctcgacccggag
gtggaagtgcggcccaccaagggccaggtggacgacctcatggccgaatgccgcctgcgc
gcggcggcgggcgagcgggtgctggtcaccacgctgaccaagcgcatggccgaggagctc
aaccagtatttcaacgccatgggcgtgcgcgcccgctacctgcactcggacatcgacacc
ctggagcgcgtggccatcatcaaggccctgcgccagggcgagttcgacgtgctggtcggc
atcaacctcctgcgcgagggcctggacatcccggaagtgtcactcgtggccatcctcgac
gccgacaaggaaggtttcctgcgctcggtccgctcgctcatccagaccttcggccgggcg
gcccgcaatgtcggcggccgggtcatcctctacgccgacgtcgtcaccggctccatgcgc
ctggccatggaggagacggcccggcggcgcgagaagcaggaggccttcaatgccgaggcc
ggcatcgtgccgcgcaccatcatcaagggcatggacagcgtgctggacagcctgtacggc
cagggggggcaggccggcgccggccgggcctccgccggctacgactcgggcggccctgcc
cggcccggggcggccgcgtccgcccgggaagagctggccgactatggcgacatgtccaag
aaggccttggagaaaaaaatcaagatgctggagcgggagatgcgcgaggcggccaaggcg
ttggaattcgagaaagcggcgcagttgcgcgaccaggtagcggcgctgcgggccaggctg
ctggagatgggctga
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