Solidesulfovibrio sp. DCME: ACP59X_15915
Help
Entry
ACP59X_15915 CDS
T11445
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
soli Solidesulfovibrio sp. DCME
Pathway
soli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP59X_15915 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soli03019
]
ACP59X_15915 (pnp)
03016 Transfer RNA biogenesis [BR:
soli03016
]
ACP59X_15915 (pnp)
Enzymes [BR:
soli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACP59X_15915 (pnp)
Messenger RNA biogenesis [BR:
soli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACP59X_15915 (pnp)
Transfer RNA biogenesis [BR:
soli03016
]
Prokaryotic type
tRNA degradation factors
ACP59X_15915 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
OB_PDCD11
KH_NusA_2nd
S1_RRP5
FhbB
Motif
Other DBs
NCBI-ProteinID:
XSC49463
LinkDB
All DBs
Position
3590619..3592880
Genome browser
AA seq
753 aa
AA seq
DB search
MTMTFDPIRLETTIGGKTVILETGRLANQADGAVWVQSGGTVVLVTACTQALPEEKGFFP
LTVDYQEMSYAAGRIPGSYFRREIGRPSEREVLVCRLIDRPCRPLFPKGFRDEVQIIATV
LSADGLVEPDVLALTAASTALHISKIPFEGPIAGGRVGYVDGQFVFNPTVPMIKGESTLN
LTFAASRDAVVMVEGGGQFVSEDMLADALEWGHKTVLPLLDLQEEMRAKAGKPKIAFVPP
APIEELETLVREKAEAGLTAAFAIKDKMPRREARKAVKKAVLEAVVEAFPEEATYKAKAG
DILEGMEKKLLRKLIKESGIRLDGRDTKTVRPIGIEVGVLPRTHGSTIFARGETKSLCVA
TLGSTGDEQKIETLNGETYKRFMLHYNFPPYCVGEVKPMRGPSRREIGHGALAERSILPV
LPGPEEFPFTMRVVSQVMESNGSSSMASVCGASLALMDAGVPVKEAVAGIAMGLIKEGDD
FLVLTDILGDEDAMGDMDFKVAGTAHGVTGIQMDIKITGIPQAVMRQALNQAKDARLHIL
GRMAETLAEPRPELSPLAPQLAVVNINPEKIREVIGPGGKNIKAITADTGASIDIEDSGK
ISIFAPTLESLEKAKARVLYYDQHAEVGANYKGRVIKIIDCGVIVEILPGLEGLVHVSQL
DVERVASPADVVKMGQELEVKVLEQEPTGRIRLSRKAVMNEERGIPYDPADYAKTGGPRR
PGGDRDRGDRRGGYDRDRGGRGGRDGGGRGGRD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgacattcgaccccatccgactcgaaaccaccatcggcggcaaaaccgtcatc
ctcgaaaccggccgcctggccaaccaggccgacggcgccgtctgggtccagtccggcggc
acggtggtcctggtcacggcctgcacgcaagccctgcccgaggaaaaaggctttttcccc
cttaccgtcgactaccaggaaatgtcctacgccgccgggcgcatccccggctcctacttc
cgccgcgagatcggccgcccctcggaacgcgaggtgctggtgtgccggcttatcgaccgc
ccctgccggccgcttttccccaagggcttccgcgacgaggtgcagatcatcgccacggtg
ctgtccgccgacggcctggtcgagcccgacgtgctggccctgaccgccgcctcgaccgcc
ctgcacatctcgaagattcccttcgagggccccatcgccggcggccgggtgggctacgtg
gacggccagttcgtcttcaaccccaccgtgcccatgatcaagggcgaaagcacgctcaac
ctgaccttcgccgcctcgcgcgacgccgtggtcatggtcgagggcggtggtcagttcgtg
tccgaggacatgctggccgacgccctggaatggggccacaagaccgtgctgccgctgctc
gacctccaggaggagatgcgcgcgaaggccggcaagccgaagatcgccttcgtgccgccc
gcgcccatcgaggagctggaaacgctggtccgcgagaaggccgaggccggcctgaccgcc
gccttcgccatcaaggacaagatgccgcgccgcgaggcccgcaaggccgtcaagaaggcc
gtcctcgaggccgtggtcgaggccttccccgaggaagccacctacaaggcgaaagccggc
gacatcctcgagggcatggagaaaaagctcctgcgcaagctcatcaaggagtccggcatc
cgcctcgacggccgcgacaccaagaccgtgcgccccatcggcatcgaggtgggcgtgctg
ccgcgcacccacggctcgaccatcttcgcccggggcgagaccaagtccctgtgcgtggcc
acgctcgggtccaccggcgacgagcagaaaatcgagacgctcaacggcgagacctacaag
cgcttcatgctccactacaacttcccgccctactgcgtgggcgaggtcaagcccatgcgc
ggcccgtcgcgccgggaaatcggccacggcgccctggccgagcgctccatcctcccggtc
ctgcccgggcccgaggaattccccttcaccatgcgcgtggtctcccaggtcatggagtcc
aacggctcctcgtccatggcttcggtgtgcggcgcgtcgctggcgctcatggacgccggc
gtgccggtcaaggaggccgtggccggcatcgccatggggctgatcaaggaaggcgacgac
ttcctggttctgaccgacatcctcggcgacgaggacgccatgggcgacatggacttcaag
gtggccggcacggcgcacggcgtcaccggcatccagatggacatcaagatcacgggcatt
ccgcaggccgtcatgcgccaggcgctgaaccaggccaaggacgcccggctgcacatcctc
ggccgcatggccgagacgctggccgagccgcggcccgagctgtcgccgctggccccgcaa
ctggccgtggtcaacatcaatccggaaaagatccgcgaagtgatcggccccggcggcaag
aacatcaaggccatcacggctgataccggcgcctccatcgacatcgaggattcgggcaag
atctccatcttcgcccccaccctcgaatccctggaaaaggccaaggcccgggtgctgtat
tacgaccagcatgccgaggtcggggccaactacaagggcagggtcatcaagatcatcgac
tgcggcgtcatcgtcgagatcctgcccggcctcgagggactcgtccacgtgtcccagctc
gacgtcgaacgcgtggccagtcccgccgacgtggtcaagatgggccaggagctcgaggtc
aaggtgctcgaacaggagcccacgggccgcatccgcctctcgcgcaaggccgttatgaac
gaggagcgcggcattccctacgacccggccgactacgccaagacgggcggcccgcgccgg
cccggcggcgaccgcgaccggggcgaccgccggggcggctacgaccgcgaccgtggcggc
cgcggcggacgggacggcggcggacgcggcggacgcgactaa
DBGET
integrated database retrieval system
