Schizosaccharomyces osmophilus (fission yeast): SOMG_00143
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Entry
SOMG_00143 CDS
T09274
Symbol
pfh1
Name
(RefSeq) 5' to 3' DNA helicase Pif1/Pfh1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
som03032
]
SOMG_00143 (pfh1)
03029 Mitochondrial biogenesis [BR:
som03029
]
SOMG_00143 (pfh1)
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SOMG_00143 (pfh1)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SOMG_00143 (pfh1)
Mitochondrial biogenesis [BR:
som03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
SOMG_00143 (pfh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
Herpes_Helicase
Mg_chelatase
T2SSE
AAA_7
AAA_11
UvrD_C_2
NACHT
ATPase_2
SLFN-g3_helicase
NPHP3_N
NB-ARC
Sigma54_activat
AAA_16
AAA
PhoH
TsaE
NTPase_1
TniB
TrwB_AAD_bind
RNA_helicase
nSTAND_NTPase5
RsgA_GTPase
UvrD-helicase
ResIII
AAA_5
AAA_14
NAT10_TcmA_helicase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
80873630
NCBI-ProteinID:
XP_056035701
UniProt:
A0AAE9W8S9
LinkDB
All DBs
Position
1:314564..316930
Genome browser
AA seq
788 aa
AA seq
DB search
MFSGLSLLKHSRSFRFNLPRMFQRAQQKNSIAYSQAKENASVNRDIHNYSSDAFQPSVPA
SKAVQHPSPNPTAPLKREFSNTILQNLDENDAFDSSDPALPIFNPPEAHERAASDTLHGI
YIDENDIDDDFAVESEIDQKAIPWSSSPVEHTKLTGSMIANANRTTSTLPRLVEEASRNT
AAQTSLSRSQQRHPIKRSRTLPWALDPFRYGDPVSSKEESAKTESKQGIVTNDSQNAAPG
SRSISLDSLPKTGLAARNGRITKKAPVSTAAAKPVDSSLFRTVSDPSRKRAVPSIFLSDE
QKRILDMVVEQQHSIFFTGSAGTGKSVLLRKIIEALKVKHRKQTDRVAVTASTGLAACNI
GGVTLHSFAGAGLARESVDFLVSKIKKNKKSMTRWLRTKVLIIDEVSMVDADLMDKLEEV
GRVIRKDARPFGGIQLVLTGDFFQLPPVPDSGKEAKFCFESNTWKTALDYTIGLTHVFRQ
KDEEFVTMLNELRLGRLSENSVRKFRFLSREINYADGLLPTELFPTRHEVERSNGMRMQQ
IHQDPLTFTSIDSGTVRDREFRDKLLQNCMAPAQLVLKINAQVMLIKNIDDQLVNGSLGK
VIGFIDEETYQIEKKDAEMQGRNPFEYDTLDVLPYDLPDVKQKKHKLLSMKKASSISTKW
PLVRFKLANGGERTIVVQRETWNIELPNGEIQASRSQIPLILAYAISIHKAQGQTLDRVK
VDLGRVFEKGQAYVALSRATSQKGLQILNFSPSKVMAHPKVIQFYKQLDSVNGIPIRNEN
KVKTGPFK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttttctggtctttctttattaaaacacagtcgttcttttcggttcaatcttcctaga
atgtttcaaagagctcagcaaaaaaatagtatagcatattctcaagcaaaagaaaatgca
tccgtcaatagggatattcacaattactcttccgatgcttttcaaccttctgttccggct
tctaaagcagttcaacacccttccccgaatccaactgctcctctgaagagagagttctca
aacacaattcttcaaaatttggatgaaaacgatgcttttgactcttcggatccagcgttg
ccgattttcaatccccctgaagcgcacgagagagccgcttctgatacattacatgggatt
tacatagatgaaaatgatatcgatgatgatttcgctgttgaatcagagattgatcaaaaa
gcaattccctggtcatcctctcccgtcgaacatacaaaattaactggatccatgattgcc
aacgccaatcgaaccacttccactcttcctcgtttagtggaagaggcctctagaaacacc
gcagctcaaacgtctttgtctcgttcgcagcagagacatcccattaagcggtctcgtact
cttccatgggctttggacccatttcgatatggtgatccagtttcttcaaaagaagaaagt
gccaaaacagaatccaaacagggtattgtaacaaatgattctcaaaatgctgcacccgga
tccagaagtatctcacttgatagcttgcccaaaactggcttagcagcacgaaacggacgt
atcacaaaaaaggcgcctgtttccactgcagctgcaaaacctgttgattcttctttgttc
agaaccgtttcggatccaagtcggaaacgagccgttcccagtatttttctttcggatgaa
caaaaacgaattttagatatggtcgttgaacaacaacatagtattttcttcactggttct
gctggtactggtaaatctgtgcttttgcggaagataatagaagctttaaaagtgaaacac
agaaagcaaacagaccgtgtcgctgttacggcgtctacgggattagcagcttgtaacatt
ggcggtgtcactttgcattcctttgcaggtgccgggttagcaagagaatctgtagatttt
cttgtatccaagataaaaaaaaacaaaaagagcatgactcgttggcttcgaacaaaggtt
ctcattattgatgaagtttctatggttgacgctgatctaatggacaagttggaagaagta
ggtcgtgttatacgcaaagatgctagaccttttggcggcatacaattggttttaactgga
gatttcttccagcttccacccgttcctgactcgggaaaagaagcgaagttttgttttgaa
tcgaatacatggaaaactgctttggattataccattggcttaactcatgttttccgacaa
aaagatgaagagtttgttactatgctcaatgagttacgtcttggtagattgtcggagaac
tcagttaggaagtttaggtttctcagtagagaaatcaattatgcagacggacttcttccg
acagagttgtttccgacgcgtcatgaagtcgagcggtcgaatggaatgcgtatgcaacaa
atccatcaagatccattaaccttcacttctatcgacagcggtaccgttcgcgacagagaa
tttcgagacaaattacttcaaaactgtatggctcctgcacagcttgtgttaaaaataaac
gcacaggtaatgcttataaaaaatatcgatgaccaattggttaatggatctttggggaaa
gtaattgggtttatcgacgaagaaacgtaccagatagaaaagaaggatgctgaaatgcaa
ggaaggaatcctttcgaatacgatactttggatgtacttccgtacgatttgcctgacgtg
aagcaaaaaaaacataaactattgtctatgaagaaagcttcatctatttccacaaaatgg
cctcttgtacgcttcaaacttgctaatggcggcgagcgaaccatagtggtacaaagagaa
acttggaacatagagttaccaaacggtgaaatccaggcctctaggagtcaaattcctttg
attctagcgtatgccatatccatacacaaagcacagggtcaaaccctcgatcgagttaag
gtagacttaggtcgcgtctttgagaaaggacaagcttatgttgctctttcaagagctact
tctcaaaaagggttacaaatactcaatttctctccttctaaagttatggctcatccgaaa
gttattcagttttacaaacagctcgattccgtcaatggtatccctattcgcaatgaaaat
aaagtgaaaactggtccttttaaatga
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