Schizosaccharomyces osmophilus (fission yeast): SOMG_00218
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Entry
SOMG_00218 CDS
T09274
Symbol
rpb7
Name
(RefSeq) DNA-directed RNA polymerase complex II subunit Rpb7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03020
RNA polymerase
som03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOMG_00218 (rpb7)
09124 Replication and repair
03420 Nucleotide excision repair
SOMG_00218 (rpb7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_00218 (rpb7)
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00218 (rpb7)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_00218 (rpb7)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SOMG_00218 (rpb7)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SOMG_00218 (rpb7)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SOMG_00218 (rpb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
80873703
NCBI-ProteinID:
XP_056034796
LinkDB
All DBs
Position
1:join(479744..480217,480267..480311)
Genome browser
AA seq
172 aa
AA seq
DB search
MPFFLKELSLTITLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTINIDKG
RVVPGQGYAEFEVKYRAVLWRPFRGEVVDAVVTTVNKMGFFADIGPLSVFVSSHLVPPDM
RFDPAANPPNYSGEDQVIERGSNVRLKIVGTRTDATEIFAIATMKEDYLGVL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttcctaaaagagctttctcttacaatcacgttacatcccagctactttggc
cctcggatgcaggactacctaaaagcaaagcttttggcagacgttgaaggaacgtgttct
ggacaatatggttatattatatgtgtacttgacagcaatactataaatatcgacaaagga
cgcgtagtcccaggtcaaggttatgctgagtttgaggtaaaatatcgagcggttttatgg
agaccattcagaggtgaagtggtagacgccgtggttaccaccgtaaataaaatgggcttt
tttgccgatattggtcctttgagtgtatttgtgtcgtcgcatcttgtacctccagatatg
agatttgatcctgctgccaatcctccaaattattctggtgaagatcaggtcattgaacga
ggatctaacgttcgattaaaaatcgtcggtactagaactgatgctactgaaatttttgcg
attgctaccatgaaagaagattacttgggagtcttatag
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