Schizosaccharomyces osmophilus (fission yeast): SOMG_00337
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Entry
SOMG_00337 CDS
T09274
Symbol
alm1
Name
(RefSeq) nucleoporin Alm1
KO
K09291
nucleoprotein TPR
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_00337 (alm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00337 (alm1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SOMG_00337 (alm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Pox_H7
Motif
Other DBs
NCBI-GeneID:
80873820
NCBI-ProteinID:
XP_056035667
UniProt:
A0AAE9W919
LinkDB
All DBs
Position
1:complement(731574..736769)
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AA seq
1731 aa
AA seq
DB search
MASGEHEDDVQFVHERFGVSPEDLKPLAKVPSFSILVVALRSKVRDLNSLKEQMVLQEVN
SEHKQNVTNRRALHLQEQLGSRNEIAKQFQEKAEELQKDVDASKEANCQIQSQLNSCSEE
KNSLVLEKQQLNSRVIDMERKLSDSENLLRSFQEEKQKNEDLIQNLQQQMQEMEENQRNL
TLNQSSSTFKEEIYLQEKNALVLDIKRLQDETKSMSEELASSKHSQNVLQEQVAALKTSN
SELGQKYTSVVHESQTKSKDKGSNTSTTAMEVDDKIDVFDDLQKELEAQQRLTSLWESQC
SELQSQLDKTVNNQSASKELDTSANSTFEEQLKMSKGQLKVANETISKLHSEVDRLASEL
QVTKQRKEVSPAGVGLFSSVAQRLNASQNPEISFTKVYSDNMRLQQAVLNLQQQLDRAND
KICWFFYQIKERIPIFQQQREEIARNNVFMVDLSEKLSTSKEVINNTKQKYQVSKLQQEE
TQLRLMATQVQCQDLMREVQCLLLNLDYLQGTGNRSLPQKIQEALDNFSKQPSGNEVAVS
VDIPNFTSVQEALAQVLQLRENIRTVECNLEIQKKASEYQLSIKTEELNEQHENVTNKLQ
SELKLANTKMQNFIHERSVLKEMLNMYKEKTVQKVSQKPPDMNGSSQAAVDDIEKQFETY
RNEMVAANESLSKRINDLISQLEKTRKEANKVKYREQLSLQRLNVSKQNVDSLGKEMKEL
RTLNSYLQEVLNRQDLNAGKISEEHIQLKSLCSRMNSEIASLTSEKEVFGKIQQRLTSEN
SNLLSERERLTNLVSNLQSLLNEQQRIFSLNKLSFEAKNSEMKQAVNSLQGSNEKLEQAL
QSANDLANMKDTDINSLRIKLEEVEATKQEYVNIRNSLESENKGLQSQLKSESNKIEELQ
TRLSHQQSMTASERETELGSVVVGLRMENSSLQTGLNVSKDHTKRLEEAIRLAEETLEKL
QQEYQTLRLSTSKQLEENRNYINALEKKGNDLEEKLRSVQQQHDYDNEQKDGKISLLIKE
NEQLSDDITSARNLEKELLQKQNLLQQENVKLSEGCRKARDAYEKELLRHANAMSNLQKL
RAEYDSVLKRTNHVSEPTGSENLIAARELKDMPDSASATPDVIALRKQNALLLAQLQTPT
DNDLSTLDITSEKLGSVMKLSLPDLQTYIKQMFNEANILACQRQLISIENKRLRKLVEQS
NQIVLEFQSTQKASTTETSSDGAPIDNNLSRMVKLLNDSNKLLRKKEEEHNGIINNLQDK
VFSLERELEVQNNHSHELENEVAGGKEMIRRVEEENQRLQQHNQQILHSLKENKITDASA
ETSNADEKLLVELRQNIEKLTTELESAKETIEKIESEKGAASNTIEQLTARSKTVAAAWR
SKYDQLVAKSLEKHNQVRQQLSQKTSELESKIKETDALKEKLQKYEESEPFEDNARDHQD
IKKVSDEFQKAEYITAQQRLAEATTELDATKKEVLSLREKIDQLDKEKISQSVGSGTTSG
EEIEKKNQALKQAVLKLRSRITQEVQKNDAVSKQCTELETQLEKLRRSLDSQTQDASDSG
SLRASDEQKLSTLLKEKENMLSGTFEIVFQEPFEKIVTSSSDFPDAVKTEWKKRQEELLK
KIQEDTKQSHERQISNLRTELEMRSKLKLSMLEKNLAKVRAELQKTTQKDKNSSVEATQP
KNDGKSSTVTSKTIESQKEPNGDKSSSGDSLKRPRSNAENEDSSLTIKKSK
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggtgaacatgaagatgatgttcaattcgttcacgaacgcttcggcgtgtct
cctgaagacctgaagcctttagctaaagtaccaagtttttccatactagttgttgcattg
cgttctaaggtacgcgacttgaattcgctaaaggaacagatggttttacaagaggtgaat
tccgaacataaacagaatgtgactaatagaagagcgttgcaccttcaagagcagctcggt
tcgcgaaatgaaattgcaaaacaatttcaagaaaaagcagaggaactccaaaaagatgtg
gatgcttcgaaagaagcgaattgccagattcagtctcagcttaactcttgctctgaagaa
aaaaattcgttagttttggaaaaacaacaactaaattcacgagttatagatatggaaagg
aagcttagtgactctgagaatctccttcgatcttttcaagaggaaaagcaaaaaaatgaa
gatttgatccaaaacttgcagcagcaaatgcaagaaatggaagagaatcagcgaaactta
acattgaatcaaagcagcagcactttcaaggaagagatttacttacaagaaaaaaatgcg
cttgttttggatataaaaaggttacaagatgaaactaaaagcatgtctgaagaactagca
tcttctaaacatagccaaaatgtgcttcaagagcaagttgctgcacttaaaacaagtaac
tctgagctgggacaaaaatatacgagcgttgtgcatgaaagtcaaactaaatcaaaggat
aaaggatcgaatacatccaccacagcaatggaagttgatgacaaaatcgacgtttttgat
gatctacagaaggagcttgaagctcaacaacgtttaacttcattatgggagtctcagtgc
tcagaacttcaaagtcaattagacaaaaccgtcaataatcagagtgcttctaaagagttg
gacacatctgctaatagcacatttgaagaacagttgaaaatgagcaaaggtcaattgaaa
gttgccaacgaaacaatcagcaaactacactccgaagttgacagacttgctagcgaatta
caagttacaaaacaaagaaaagaggtatctcctgcaggtgttggtcttttttcatcagtc
gctcagagattaaacgcatcacagaacccagaaatatcttttacgaaagtgtattctgac
aatatgcggttacagcaagctgttttgaatttacaacaacaacttgatcgtgctaatgat
aaaatctgttggtttttctatcaaattaaagaacgtataccaatttttcaacaacaaagg
gaagaaatcgcaagaaataatgtttttatggttgacctaagtgaaaaattatccacatca
aaagaagtcataaacaacacgaaacagaaatatcaagtttcaaaactgcaacaagaagaa
actcaattaagacttatggctactcaagttcaatgtcaagatctgatgcgggaggttcag
tgccttctcttgaacttggattatttgcaagggacgggaaatagaagcttacctcaaaaa
atacaagaagctttggataatttttctaagcagccatcggggaatgaagtcgcagtttca
gttgatatccccaactttacgtctgtacaggaagctttggcacaagttttacaacttcgc
gaaaacataagaaccgttgaatgcaacttggaaatccaaaagaaagcttctgagtaccaa
ctttcaattaaaaccgaagaattgaatgaacagcatgagaacgtgacaaataaattacaa
agtgagctaaaattggccaacacgaagatgcagaattttattcacgaacgtagtgtcctt
aaagaaatgttgaacatgtataaagaaaagactgttcaaaaagtttcccagaaaccccct
gatatgaatggttcttcacaagcagctgttgatgatattgaaaaacaatttgagacgtat
cgcaatgagatggttgcggctaacgaatcactttctaaaaggattaacgatctaattagt
cagcttgaaaaaacgagaaaagaagcgaacaaagtgaaatatcgtgaacagttaagccta
caacgactgaatgtatcaaagcaaaatgttgactctctcgggaaagaaatgaaggagtta
aggacccttaatagttatcttcaagaagtccttaatcgccaagatttgaatgctggtaaa
atatcagaagagcacatccaacttaagtcattatgttcaaggatgaacagcgaaattgcg
agtttgactagtgaaaaggaggtttttggtaaaattcaacagcggttgacttcagaaaat
agtaatttgctgagtgagcgggaacgtttgacgaatcttgtttctaatttgcaatcactt
cttaatgagcaacaaaggatcttttcactcaataagctatcttttgaggctaaaaatagc
gaaatgaagcaagctgtaaactcattgcaaggttctaatgaaaagcttgaacaagctttg
cagtcagcaaatgacctagccaatatgaaggatacagatattaattctcttcgcataaag
ctcgaagaagttgaagctaccaaacaagagtacgtaaacataaggaactctctagaatcg
gaaaacaaaggactacaatcacaactgaaatcagaaagcaataaaatagaggaactccaa
acaagactatctcatcaacaatcgatgacagcttccgaacgagaaactgagttgggttca
gtcgtagttggtttaagaatggaaaattcgtctttgcaaactggtctcaatgtgtcaaaa
gaccacacaaagcgccttgaggaagctattcgcttagctgaagaaacattagaaaagctt
caacaggaataccaaacactgcgattgtcaacttcgaaacaactagaagaaaatcgtaat
tatatcaatgctttagagaagaaaggcaatgatctcgaagaaaaactccgcagcgtgcag
cagcaacacgattatgataacgagcaaaaggatggcaaaatttctctacttattaaagaa
aatgagcaactatcagacgatatcacaagtgctcgtaatttagaaaaagaattacttcaa
aaacaaaatttgctacaacaagagaatgtgaaattatctgaaggttgccgaaaagctcgc
gatgcttatgagaaagaattgctcaggcatgcaaatgccatgtcaaatcttcaaaagctc
agggctgagtatgattctgtactgaaacgtacaaatcatgtttctgagcctactgggtct
gagaatctcattgcagctcgagagcttaaagatatgccagattcagcttctgcaacacca
gatgtgattgcactaagaaagcaaaatgctttacttcttgctcagttacaaacaccgact
gataatgacttatctaccctagacatcacttctgaaaaacttggttccgtcatgaagctt
tcattaccagatcttcaaacttacattaagcaaatgtttaatgaggctaatattttagca
tgccaaagacagcttatatcaattgaaaataagaggttaagaaagctggttgaacaatca
aatcaaatagttctggaatttcaatcgacgcaaaaagcttcaacaaccgaaaccagttcc
gatggtgcacccattgataacaatctttcccgaatggtgaagttattgaatgatagtaat
aaactgttgcgcaaaaaggaagaagaacataatggcattattaacaacttgcaagataaa
gtcttctctcttgagcgtgaactggaagttcaaaacaatcactctcatgagctagaaaat
gaggtagcgggagggaaagaaatgatccgtcgagttgaagaagaaaaccagagactgcaa
cagcacaaccaacaaattctccactcattgaaagaaaacaagattacggatgcttcggcg
gagacttcaaacgctgatgaaaaactgttggttgagctacgccaaaatattgagaagtta
actaccgaacttgaatcagctaaagagacaatagaaaaaatagaatccgaaaaaggagcg
gcttcgaatacgatcgaacagttgactgctagaagcaaaactgttgccgccgcatggaga
tctaagtatgatcaacttgttgctaagagtttggaaaagcacaatcaagttcgccagcaa
ctttctcaaaaaacttcggagcttgaatcgaaaatcaaagaaactgacgcgcttaaagaa
aaacttcagaaatatgaagaaagtgaaccctttgaagataatgctagggatcatcaggat
atcaaaaaggttagtgatgaatttcagaaggctgaatatataacagcccagcaaaggcta
gcggaagctacgactgaattagatgctaccaaaaaggaagttttatcattgagggaaaag
attgatcaacttgataaagaaaaaatatctcaatccgttggttctggaacgacaagtgga
gaagaaatagaaaagaaaaatcaagctttgaaacaggctgtcttgaaattacgttctcgg
attactcaagaagtacaaaagaatgatgctgtgagtaaacaatgtacagaacttgaaaca
caattagagaagttgcgtagatcgttagattcgcaaacacaggacgcaagtgattcagga
agcttaagggcatctgatgaacagaaattgagtactcttttaaaagaaaaggaaaatatg
ctttctggtactttcgagattgtcttccaagagccctttgagaagatagttacttctagt
tctgacttccccgatgcagtaaaaacggaatggaaaaaacgtcaagaagaactacttaaa
aagattcaggaggatacgaaacaaagccatgaacgacaaatcagcaacctcaggactgag
ttagaaatgagaagcaagttaaaacttagcatgcttgaaaagaatttagcaaaagttcga
gccgagctgcaaaagactactcaaaaagataagaactcttcagttgaagcaacacaaccg
aagaacgatggcaagtctagtacggtaacttcgaagacaattgagtctcaaaaggaacca
aacggtgataagtcatcttctggcgattctttgaaacgacctcgatcgaatgctgaaaat
gaagattcctctttaactattaagaaatcaaaatga
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integrated database retrieval system
