Schizosaccharomyces osmophilus (fission yeast): SOMG_00338
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Entry
SOMG_00338 CDS
T09274
Symbol
nup189
Name
(RefSeq) nucleoporin Nup98 and Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_00338 (nup189)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00338 (nup189)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_00338 (nup189)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SOMG_00338 (nup189)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SOMG_00338 (nup189)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
80873821
NCBI-ProteinID:
XP_056035602
LinkDB
All DBs
Position
1:737111..742573
Genome browser
AA seq
1820 aa
AA seq
DB search
MFGQNNSSGFGGGTGGFGQNNQQTGGLFGSNTNTTGNSLFGSQNNNAGGFGQNTAQPLFG
SSTGGGLFGNRNPPPATAPAPAPAPAPGSAGTGFGMNSGTGSGLFGQSSAPAFGGTNTSS
GGGLFGNAGGAAAPSAGSAFSFGSNNPGTTGGFGSTPANTGSTGGFFGSQNNSSGSTGFG
AQPPSGGGMFGSASTGQAPAFGSSGFGAGSTNTINGTDNPPYAVTSEKDAQTNGTSAFQS
ITCMPAYRQYSFEELRLQDYNQGRRFGNPANVTSTPSTFGSTPGFGTSTTGFGQTATPTS
NSITPFGSSNTNTNTGGGLFGGGPAFGANNPSTTSGFGANTTNTGGGGLFGQSNQASTTP
STGLFGGAGSGSTFGQQKPAFGFGSNTNTGSGSGGLFGSSTSNPATNTAGTGAGTGTGGG
LFGNAGGGFGASTAGTGFGSSAPNNPPASNPPGGGLFGFGNNATSGTNTSAPGSSGLGSG
SGFSFGANNAASKPSGFGFGSSTGTGTGTGTSAPATSGFSFGQPSSTAPKPAFGTGSTAP
SAKPAGGGLFGGFGANSTPSTATNNAAGNTGSTGGLFGNTGSTAGGLFGSTNTNTGGSGL
FGNNTALNNPPNTGGGLLGSGTNTSTTPGAGLFNKPSTGPGLFGSNNTLQQPSTTGSSGL
FGSSNMNNQAQPSTLGSGLFGGASQSGQQQQQPLQASIDQNPYGSNPLFSSTVSQTAPTS
IQEPIASPLTTQPAPKKAASLPQFWLSPRSSSRSTVASISPFAKSAVMNSATAPSKPKSL
HLFDSLNDDVLLSKDAFTPRQNIKKLVITPKVSRDEMFRNENISKPSEEVSKTNDAMKQE
TTKVESDRTYTLPDGYWMKPGVEELVKYPKDKLTTVPQFCVGRSGYGQVSFLKPVDLTKF
EKFEDIPVNVVLFEKKICSVYPEEGSSPPVGEGLNVPAIITLENAWPLSRETREPIKDVD
HPRYAQHMKRLQKIKETEFIDFNDGKWTFKVQHFSKYGLFDEDSENDEDLEDEPANNEVS
LNRDLGNSEMYEKSSHQGSQCNKTQLTHNTPGSFPPNNQLNTFRKFNDQNDNFDDNSSKK
AKVQTEVLGASYPVSSKDNKIEKEDETNDLLSNMTDSPNDSNELKNEDILEDESDEVLDA
NVQNSKEAVSNLINPSTWLEHLNLGLQRSVLIKSKMANTSSSVQGNKEATGSFAYDQYDL
EKDLFGGSIIAKNVSTDFTDTGAKNIPKFHLYPNGSYVQIKNGILKMDSAENLFSLSSTR
NENLIKLFEYQLSKSEVYVDANGVCSISPRLSMVVGDLVAFTKSVDQIKVWELASILFDK
KDFEVPVSLSLEAREVLSEKLVRDCLSEWITKIVKEEILAKAQKATSSEEKIFILLTGNQ
ISLACEEAVNSENNRLSTLIPLVDSDFDIQAEVKQQLNQWRERGDLAYINKYTRLIFELL
SGNTNLAEGCGRSGEEGYVSSMFVSQELSWICAFGLKLWYNTDINIAEAMSLYMESLKMY
EKELQRPTVYSDSNGEIYDLMFLLLKAYAVGATLEEFTLPESAKCHPLDYRVVWQLAIFL
SKARGICDFSDRDGGMDEVVGEDGIHFKPQSVRADILTLSLASQLESMGYWQWSLFVLLH
AENVEIRISSIKNCLARNVKMGLTDYDEKLVSDLLIPKSWIHEAKALSARYNGEHAKEVT
FLQEANLFEEAHTCLIRSIAPQAIISNNFKELKCLLEGFRERMEGVVGWNFGGQLYSDYL
DLVDGKYENNVEMLKFILQRITVALKEAESQSIHQKASLYKMTRYVNKLCLSQSLDDVAF
SLPLTTANSLQNLQYVSVQF
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaaaataattcttccggtttcggcggaggaactgggggttttgggcaaaat
aaccagcaaactggaggtttgtttgggtccaatactaatactacagggaatagtttattt
ggttcccaaaacaataatgcaggtggctttggacagaacaccgcacaacctcttttcgga
tcaagtaccggaggtggcttatttggtaatcgcaaccctccaccagcgactgcacctgct
cctgcccctgcacctgctcctggttcagcaggtacgggatttggaatgaattcgggaacc
ggaagtggtttattcggtcagtctagcgctcctgcttttggtggtacaaacacatcaagt
ggtggtggcctttttggtaatgcaggcggtgctgctgctccttctgcgggaagtgcgttt
tcatttggctccaacaatccaggaactactggtggatttggtagtacaccagcaaacact
ggctctaccggtggcttctttgggtcacaaaacaattcctctgggagcacaggatttggt
gctcagcctcctagtggtggtggtatgtttggctcagcatcgactggtcaagctcctgct
ttcggttcttcgggatttggagcaggaagcacgaatacgatcaatggtacggataatcct
ccttacgcggtaacatctgagaaggacgcacaaactaatggtacaagtgctttccagtcc
ataacgtgtatgccggcgtataggcagtattcttttgaagagttacgcttacaagattat
aatcaaggtcgtcgatttggaaatcctgcgaatgtaacttccactccatcaaccttcggg
tctactcctgggtttggtacttccactacaggtttcggccagacagccactcctacttca
aattcaatcactccctttggatcttctaatacgaatactaatactggtggaggtcttttt
ggtggcggtcctgcatttggtgctaacaatccgagtactacttcaggattcggtgcgaat
actacgaacaccggaggtggcggattgtttggtcaatcaaatcaagcatcaactactcct
tcgactgggttatttggcggtgccggcagcggatcgacttttggccaacaaaaaccagct
tttggttttggctccaatacaaataccggtagtggtagtggcgggctatttggctcttcg
acctccaaccccgctaccaataccgctggtacaggcgcaggtacaggtacgggaggcgga
ttattcggtaacgccggagggggttttggagcaagtaccgcaggcacgggattcggtagc
tctgctccaaataacccacccgcatccaatccacctggaggtggtttgttcggatttggt
aacaatgctacttccggaacaaatactagcgctcctggtagctcaggccttggctccggc
agcggcttttcctttggtgctaataatgctgcttctaagccatcaggctttggattcggt
tcaagcacgggtacgggtactggtactggcactagtgctccggcgacatctggtttttct
tttggtcagccgtctagtacagctcctaagccggcatttgggaccggttctactgcaccc
tctgctaaacctgctggtggcggtttatttggtggatttggtgctaacagtaccccttct
acagctaccaataatgcagctggtaacacaggctctacgggaggtttatttggtaataca
ggctctaccgccggaggtctgtttggtagcaccaatactaacaccggtggttccggtctt
tttggaaataatacagctttaaataaccctcccaacacaggaggcggtttattaggatct
ggtacgaatacttctactacaccaggtgctggcctgtttaataagccatcaacaggacct
ggtttatttggttctaacaatactttgcaacaaccctctactacaggttcttccgggttg
tttggctcctcaaacatgaataatcaagctcaaccatctaccttgggctctggattattt
gggggtgcttctcagagtggacagcaacagcaacaacctcttcaagccagcattgatcag
aatccatatggcagtaatccattgttttctagtacagtatctcagaccgcaccaacttcg
atacaggagcctattgcttcgcctttgacaacccaacctgccccaaagaaagcagcatca
ttgcctcaattctggctatcccctagatcgagtagtcgttccactgttgcttccatctct
ccttttgcgaaatctgcggtaatgaattcagcaaccgctccaagcaagccaaaatcttta
catttgtttgattcactaaatgatgacgtcctattaagcaaagacgctttcactcctagg
cagaacattaagaaattggtcataactccaaaggtgtcacgagatgaaatgtttcgaaat
gaaaatatatctaagccttctgaagaagtatcaaagacaaatgatgctatgaagcaggag
acaacgaaggttgaaagtgatcgaacttatactttacctgatggctactggatgaaacca
ggagttgaggaattggttaaataccctaaggacaaattaactacggtaccccaattttgt
gttgggcgttcgggttatggtcaagtttcctttttaaaacctgtcgatttgactaagttt
gaaaagtttgaagatatccctgtcaatgttgtccttttcgagaaaaaaatatgctctgtt
tatcctgaggaagggtctagtcctcccgttggagaaggtttaaatgtccctgccattatt
actcttgaaaatgcgtggcctctatctcgagaaacaagggaacctatcaaagatgttgat
catcctagatatgctcagcatatgaagcgacttcagaaaattaaggaaacagagtttatt
gattttaatgatggtaaatggaccttcaaagttcaacacttttctaaatacggactgttc
gatgaagattctgaaaatgatgaagatttagaggatgagcccgccaacaacgaagtttca
ttgaaccgtgatttaggtaattcagaaatgtatgagaagtcgagtcatcaaggctcgcaa
tgtaacaagacacaacttactcacaatactccaggctcttttcctcccaataatcaacta
aacactttccgtaaattcaatgatcagaatgataactttgatgacaattcatcaaagaaa
gcaaaagtgcaaacagaagtacttggagcttcatatccggtatcttcaaaagataataag
atagagaaagaagatgaaacgaatgatttgttatcgaacatgacggatagccctaacgac
tcaaatgaattgaagaatgaagatattttggaggatgagtctgatgaagtacttgacgca
aacgtgcaaaattcaaaggaggcagtgagtaatctgattaatccgagtacgtggctggaa
catctgaacttggggttacaaagatctgtattaataaagtctaaaatggccaacacttct
tcctcggtacagggcaataaggaagcaactggtagctttgcttatgaccagtatgatttg
gaaaaagacctgtttggaggtagtataattgccaaaaatgtttcaactgattttacggac
actggtgcgaaaaatattccaaagtttcatctttatccgaatggatcttacgtacaaata
aaaaatggaattctaaaaatggattcagcggaaaatctgttcagcctttctagcacaaga
aacgaaaatttgataaagctttttgagtaccagctctctaaaagcgaagtatatgttgat
gctaatggtgtatgttctatatcaccgcgtttatcaatggtggtcggagatttagtagca
tttacaaaaagcgttgatcaaattaaagtttgggaattagcgtcaatattattcgacaag
aaagactttgaagttccagtgtctttgtctcttgaggctcgagaagtgctttccgaaaag
cttgttcgcgattgtttgtctgaatggattacaaaaatcgtaaaagaagagatattagca
aaggctcaaaaggctacatcctcagaagaaaaaatatttattttattgaccggcaatcaa
attagccttgcgtgtgaagaggctgtgaattcggaaaataatcgtttatcgacgttgatt
cctcttgtcgatagcgattttgatatccaagccgaagttaagcaacagctgaatcaatgg
cgagaacgaggtgatcttgcttatatcaacaagtatacccgtcttatctttgaacttctc
tctggtaacaccaacctagctgagggttgtggaagatctggagaagagggttacgtttct
tcgatgtttgtctctcaggaattaagttggatatgtgcttttggcttgaaattatggtat
aacactgatatcaatattgctgaagctatgtcgctgtacatggagtccttgaaaatgtac
gaaaaagaattacaaaggcccacggtgtatagtgactcaaatggagaaatttacgatcta
atgtttttgttactgaaagcgtatgctgtcggagcaaccctagaagaatttacgctccca
gaaagcgcaaaatgccatccactagactatcgggtggtttggcaattggcgatttttcta
tcaaaagctcgaggtatctgtgatttttcagacagagatggcggcatggatgaggttgta
ggtgaagatggtatacacttcaaacctcagagcgtaagagcagatattttaacactttcg
cttgcctctcagctcgaaagtatgggttattggcagtggtctttatttgtgctcctgcac
gcagaaaatgttgaaatacgtatatccagcattaaaaactgccttgcgcgaaatgttaaa
atgggtttaaccgattatgatgaaaaattagttagcgacttactcatcccaaaaagctgg
atacatgaagcgaaggcattaagtgctcgttataatggagaacacgcgaaagaagtaacc
ttccttcaagaagcaaatttatttgaagaagctcatacatgcttaattcgaagcatcgct
cctcaagccattatcagcaataactttaaagaattgaagtgcttgttggaaggattccga
gaacgaatggaaggagttgtgggttggaatttcggcggacaactgtactctgactatctt
gacctggtagacggaaagtatgaaaataacgtcgaaatgttaaaatttattttacaaaga
attactgttgcactgaaagaagctgaatcacagtcgattcatcaaaaggcctctttgtat
aagatgacccgttatgttaacaagctttgcctaagccagtcgttagacgatgttgcgttt
agtttgcctcttacgaccgccaacagtcttcagaatttgcagtacgtttccgttcaattt
taa
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