Schizosaccharomyces osmophilus (fission yeast): SOMG_00389
Help
Entry
SOMG_00389 CDS
T09274
Symbol
ssc1
Name
(RefSeq) mitochondrial (2Fe-2S) cluster assembly chaperone Ssc1
KO
K04043
molecular chaperone DnaK
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_00389 (ssc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00389 (ssc1)
03110 Chaperones and folding catalysts [BR:
som03110
]
SOMG_00389 (ssc1)
03029 Mitochondrial biogenesis [BR:
som03029
]
SOMG_00389 (ssc1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
som04147
]
SOMG_00389 (ssc1)
Messenger RNA biogenesis [BR:
som03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SOMG_00389 (ssc1)
Chaperones and folding catalysts [BR:
som03110
]
Heat shock proteins
HSP70 / DNAK
SOMG_00389 (ssc1)
Mitochondrial biogenesis [BR:
som03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
SOMG_00389 (ssc1)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
SOMG_00389 (ssc1)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SOMG_00389 (ssc1)
Exosomal proteins of breast cancer cells
SOMG_00389 (ssc1)
Exosomal proteins of colorectal cancer cells
SOMG_00389 (ssc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
Motif
Other DBs
NCBI-GeneID:
80873872
NCBI-ProteinID:
XP_056036287
UniProt:
A0AAE9W9A3
LinkDB
All DBs
Position
1:complement(846856..848877)
Genome browser
AA seq
673 aa
AA seq
DB search
MISPRITQVVRNGLRLQGQRSAAGFGAAASRLGSGLRWNSTEAPNDKVQGPVIGIDLGTT
TSCLAIMEGETPKVIANAEGTRTTPSVVAFNKDNERLVGVSAKRQAVINPENTFYATKRL
IGRRFKEPEVQRDIHEVPFKIVEHTNGDAWLEARGNKYSPSQIGGFVLGKMKETASDFLG
KNVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVMRVVNEPTAAALAYGLDKKNDAVVAVF
DLGGGTFDVSVLELNNGVFEVRSTNGDTHLGGEDFDIAIVRHIISTFKNTDNIDLTGDRL
AVQRIREAAEKAKCELSTLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTI
DPCKRALKDANLQVTDINEVILVGGMTRMPRVLDTVKSIFKREPAKSVNPDEAVAIGAAI
QGGVLSGHVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQSAVE
IRVFQGERELVRDNKLIGNFQLGGIAPAPKGQPQIEVSFDVDADGIINVSARDKATSKDN
SITVAGSSGLSESEIESMVADAEKYRAADMARKDAIENGNRAESVCMDIESNLDIHKEKL
EKQGVEDLRAKITDVRENIAKANSGDESVTGEDLKKKIDEIQQASLKVFETVYKNNQNEG
NESGNASGEGEKK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcctagaatcactcaagtagtccgaaatggattacgactccaaggacagcgt
tctgctgctggatttggagctgctgcttcccgccttggatctggccttcgttggaactct
actgaagctcccaacgataaggttcaaggtcccgtgattggtattgacttgggtactacc
acctcttgtttggcaattatggagggtgagacccccaaggtcatcgccaacgctgaaggt
actcgtactactccctcggttgttgccttcaacaaggataacgaacgtttggttggtgtt
agtgccaagcgtcaagccgttatcaaccctgaaaacactttctacgctaccaagcgtttg
atcggccgtagattcaaggaacctgaagttcaacgtgatattcacgaagttcccttcaag
attgtcgaacacacaaatggtgacgcctggttagaagctcgtggtaacaaatactctccc
tctcaaattggtggtttcgttcttggtaagatgaaggaaaccgctagtgacttcctcggt
aaaaatgttaagaatgctgttgtaactgttcctgcttatttcaacgactctcaacgtcaa
gctactaaggccgctggtgccattgctggtttgaatgttatgcgtgttgttaacgaaccc
actgctgctgctttggcttatggtcttgacaagaagaatgacgccgttgtcgctgttttc
gacttgggtggtggtacttttgatgtctccgttcttgagttgaacaacggtgttttcgaa
gttagaagcaccaacggtgatacccacttgggtggtgaagactttgacattgctatcgtt
cgtcacatcatcagcacctttaagaacaccgataacattgacttgactggtgaccgtttg
gctgttcaacgtatccgtgaagccgctgaaaaggccaagtgcgaactttccaccttgtcc
aagactgatatcagccttcctttcatcaccgctgatgccactggccctaagcacatcaac
atggaaatctctcgtgctcaattcgaaaagcttgttgaccccttggttcgccgcaccatc
gacccttgcaagcgtgccttgaaggatgccaacttgcaagttactgacatcaacgaagtt
attctcgttggtggtatgactcgtatgcctcgtgttttagacactgtcaagagcattttc
aagcgtgagcccgccaagtctgtcaaccctgatgaagctgttgccattggtgccgctatt
caaggtggtgtcttgtctggtcatgtcaaggatcttgttcttttggatgttactcctttg
tccttgggtattgagaccttgggaggtgttttcactcgtttgattaaccgtaacaccacc
atccccacccgcaagtctcaagttttctctactgccgctgatggccaaagtgccgtcgag
attcgcgttttccaaggtgaacgtgaacttgttcgtgataacaagttgattggcaacttc
caacttggtggtatcgctcctgctcctaagggtcaaccccaaattgaagtttctttcgat
gttgatgctgatggtatcattaacgtctctgctcgtgacaaggccaccagcaaggacaac
tccatcactgttgctggctcctctggtttgagcgagtctgaaatcgaatctatggttgcc
gatgctgagaagtaccgtgctgctgatatggctcgtaaggacgctattgagaacggtaac
cgtgctgaaagtgtctgtatggacattgaatccaaccttgatattcacaaggaaaagctt
gagaagcaaggtgttgaggacttgcgtgccaagattaccgatgttcgtgaaaacattgcc
aaggctaacagcggtgatgagagcgtcaccggtgaagacctcaagaagaagattgacgag
attcaacaagcctctcttaaggttttcgaaactgtttacaagaacaatcaaaatgaaggt
aatgaatctggtaacgcttcaggtgaaggtgagaagaagtaa
DBGET
integrated database retrieval system
