Schizosaccharomyces osmophilus (fission yeast): SOMG_00393
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Entry
SOMG_00393 CDS
T09274
Symbol
paf1
Name
(RefSeq) RNA polymerase II associated Paf1 complex
KO
K15174
RNA polymerase II-associated factor 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
som00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
SOMG_00393 (paf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_00393 (paf1)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
SOMG_00393 (paf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
80873876
NCBI-ProteinID:
XP_056036505
UniProt:
A0AAE9W9L5
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Position
1:join(858918..858995,859069..860568)
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AA seq
525 aa
AA seq
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MPSSDIQNKDLLKGSVNSSLYSTTHTSNRRQDYILRVRYHNPLPPPPFPPRLINISNPVK
QYALPNFVSNVVQEKKIAIENDAELGMPMDLAAVDGFFEGDTSWMQSDMSGMNLDPADRA
LLKVAGGSGSSHVEVPFLRRTEYISSEVGRNTSTRGNLRLTASTSKAIAEQRGRSLREIP
NQIGAIDQTFSAVKEPLQNLKHPTKPDLKPVGAWNLLPNDSMAGIQHLMLRVSDNLTDRA
PTPSTSEEDDVSKRHRVALFMPSSAEGEQYLSYYLPSEEAAEKVQQASNDSSSTEGPFLY
NLFRNFDATMHVNPSGLEDLCLSLHTDKENPKNSQALYTPVYARSTLKRRHVRAPVNPDT
IDGIELRLRKINKEEGVQLKRARYDSFAMGDEEALVKEEQEIAEEQVGEENELNEIEEQQ
QGSNIQSESVENVQPLSTEESGQVPTHNEQNEEGKESEDQGEQNRQSEIVNDKNNKSSSD
ESENIIEGDHQSQQEEPKLNPAEEVETNAPTANSPSPASGSSSNS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtagtgatatacaaaataaggatttactgaaaggctctgtaaacagcagccta
tactccactacacatacttcaaataggaggcaagattatattcttcgggtgagataccat
aatccactccctccacccccatttcctcctaggctcattaacatttcaaacccagtcaag
caatatgccttgccaaattttgtgtctaatgtagttcaagaaaagaaaattgcgattgaa
aatgatgctgaacttggaatgcccatggatttagctgctgttgatggatttttcgagggt
gatacgtcctggatgcaatccgacatgtctggtatgaatttggacccagccgatcgtgct
ttgctcaaagttgctggcggatctggctcttctcatgttgaggtcccatttttgcgacga
actgaatacatttcttctgaagttggacgaaatacctcaactcgtggtaatttgcgattg
acggcttctacgagcaaagcaattgctgagcagcgcggtcggtcgcttcgtgaaattccc
aatcaaattggggctattgaccaaaccttttcggccgtgaaggagcctttgcaaaattta
aaacatccaacaaaacccgacttgaaaccggttggtgcttggaaccttttgccaaacgat
tcgatggcaggcattcagcatcttatgctacgtgtttctgataaccttacagaccgtgct
cctactccgtcaacgtctgaagaagacgatgtttccaaacgacacagagttgctcttttt
atgccttcttccgcagaaggagaacaatatttatcttactatcttccttcagaagaggcc
gcagaaaaagttcaacaagcctccaacgactcttcctcgactgagggccctttcttgtat
aacttattccgcaattttgacgccactatgcatgttaatcctagtggtttagaagattta
tgtttaagtctccacacagacaaagaaaatcctaaaaacagccaagccctatacactcct
gtttacgcacggtcgacattaaaacgacgacatgttcgtgctcccgtcaaccccgacaca
attgatggtatagagttgagattacgaaaaataaacaaggaagaaggtgtgcagttgaaa
cgggctaggtatgattcgtttgcaatgggcgacgaggaagctcttgtgaaggaggagcaa
gaaattgctgaagagcaagtgggagaagaaaatgaacttaatgaaattgaagagcaacaa
caaggctcgaatattcagtcagagtctgtagaaaatgttcagccattgtccactgaggag
tcaggacaggttcccactcacaatgaacagaacgaagaagggaaggaaagcgaagatcaa
ggtgaacagaatcgacaatcagaaattgtcaatgataaaaataataaatccagctcagat
gagtccgagaatataattgaaggagatcaccaaagtcaacaggaagaaccaaaattgaat
cccgccgaagaggttgaaaccaatgctcctactgctaattcaccctcacctgcgtcggga
tcatcctctaattcttaa
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