Schizosaccharomyces osmophilus (fission yeast): SOMG_00463
Help
Entry
SOMG_00463 CDS
T09274
Symbol
sec13
Name
(RefSeq) GATOR2-SEACAT complex/COPII-coated vesicle component/nuclear pore outer ring WD repeat protein Sec13
KO
K14004
protein transport protein SEC13
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
som04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_00463 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SOMG_00463 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00463 (sec13)
04131 Membrane trafficking [BR:
som04131
]
SOMG_00463 (sec13)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SOMG_00463 (sec13)
Membrane trafficking [BR:
som04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
SOMG_00463 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SOMG_00463 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
SOMG_00463 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Hepsin-SRCR
IKI3
Motif
Other DBs
NCBI-GeneID:
80873946
NCBI-ProteinID:
XP_056035305
LinkDB
All DBs
Position
1:complement(join(1011178..1012035,1012105..1012140))
Genome browser
AA seq
297 aa
AA seq
DB search
MTTIDSQHDDMMHDAILDYYGKRLATCSSDHTIKVFSLENNQQTLLEVLHGHTGPVWQLD
WAHPKFGTILASASYDGHVIVWREVDGVWRQLIDYSAHQASVNAVSWAPHEYGALLACAS
SDGKVSVLDFKDDGSYDTRMFSTHESGCNAVCWSPPSLSGSIVGQSPAAGPKKLASAGCD
NLVKIWAFDSNVNNWILEDTLTGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEG
DCPWQKTPLTEEKFPDVAWRVSWSLSGNILAVSCGDNKVYLFKESNKKWQLINELSG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgactacaatagactcacagcatgatgatatgatgcacgatgcgatattggattactat
ggaaaacgtttggctacttgttcgtctgaccacaccatcaaggtgttctctttggaaaat
aaccaacaaacattattagaggtccttcatggtcatacaggccctgtttggcagttagac
tgggctcatcctaagtttgggacgattctcgcttctgcttcgtatgatggtcatgttatc
gtttggcgtgaagttgatggtgtttggagacaattaattgattatagtgctcaccaagct
tccgtcaatgccgtttcctgggctcctcatgagtacggggctcttcttgcttgtgcaagc
tcagacggcaaggtttccgtcttggattttaaagatgatggttcatatgataccaggatg
ttttccacccacgagtccggctgtaatgccgtttgctggtctccgccaagtctttcgggc
tcaatcgtaggtcagtcaccagctgcaggccctaagaagttagctagtgcaggatgcgac
aatcttgttaaaatttgggcatttgattctaatgtcaacaactggattttagaagatact
ctcacaggccatgtcgactggactagagacgttgcttgggctcccagtgttggccttacc
aaaacataccttgcatctgcttctcaagacaaaaacgttttcatatggacaaaggagggt
gattgcccttggcagaaaactcccctaactgaagagaagttcccagatgtcgcttggcgt
gtttcttggtctctttccggtaatatcctcgctgtatcttgcggtgacaacaaggtttac
cttttcaaagaatccaataaaaaatggcaactgattaatgaattgagtggttaa
DBGET
integrated database retrieval system
