Schizosaccharomyces osmophilus (fission yeast): SOMG_00487
Help
Entry
SOMG_00487 CDS
T09274
Symbol
vps36
Name
(RefSeq) ESCRT II complex subunit Vps36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SOMG_00487 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_00487 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
som04147
]
SOMG_00487 (vps36)
Membrane trafficking [BR:
som04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
SOMG_00487 (vps36)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SOMG_00487 (vps36)
Exosomal proteins of colorectal cancer cells
SOMG_00487 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Zn_ribbon_RanBP
Vps36-NZF-N
DZR
PH_TFIIH
GSH_synth_ATP
Interfer-bind
eIF3_subunit
Motif
Other DBs
NCBI-GeneID:
80873970
NCBI-ProteinID:
XP_056036747
UniProt:
A0AAE9WBC3
LinkDB
All DBs
Position
1:complement(1057189..1058619)
Genome browser
AA seq
476 aa
AA seq
DB search
MTFYLETTSSSLPVLEAKEEIVHAQNCVGLYFDDKKSLDYANGTLYISQKHVFYVDFQNP
KKNSLKIRLSDIVELNHSSRYFRSSPKVHLYLKFVQEKWACKICFYNNLGSTLDPCMNCG
VAGRFRLLQADCHLTGEEKRKKGICPTCTFQNYPDLLFCEICGTQLTRLPTAEHIQLSFR
NGGSSKFFEVLNEQRQELIENRSNALQDTNHLKKIINEKSLRIGGIHDLQQSHALKLAHN
GQTLVRAFQDLDAFFSLTQETMELADQFVERIQNLAGFAKQSDQVQQLLKRTHQLGLLRN
NYANMVSDNSNARLFQVELCKSISELLLNHLKSDTDTVTMTHAWAMYNRARKTELVSPAD
FAKACELFSNLDLGISVSKLSSGALLFQLKLPNQKEKFLSALMQTMQPSITISQCAMKLH
WSIGVTMEQLESAESEGYIVRDIHEDIGFGVQYWKNQFQSFESELSHLLFSSQNNI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacattctatcttgaaaccactagttccagccttccagttctcgaagccaaagaagaa
attgtacatgcacaaaattgtgttggattatattttgacgacaagaagagtctcgattat
gcgaatgggacgttatacatttcccaaaaacacgttttttatgtagattttcaaaacccg
aaaaagaactctctgaaaattcgcttgtccgatatagttgagctaaatcacagttcacgg
tattttcgatcttccccaaaggttcatctctatcttaaatttgtgcaagagaagtgggct
tgtaaaatatgcttttacaataatttagggagtaccctggatccctgcatgaattgcggc
gtcgcaggtcgatttcgtcttttgcaagcagattgccatctcactggagaagagaaaaga
aaaaagggaatttgtcctacctgcacttttcaaaactacccggatttattgttttgcgag
atttgcggtacccagctcactcgtttacccactgcagagcatattcaactttcctttcga
aatggtgggtcttctaagttttttgaagtactcaatgaacagaggcaggaattaattgaa
aataggagtaacgccttacaagatactaatcatctcaagaaaataatcaatgaaaaatct
ctacgaataggaggaattcatgatcttcagcaatctcatgccctcaaacttgctcataat
gggcagacacttgttagagcatttcaagatttagacgcctttttttcgctaacccaagag
acgatggaattggcagatcaattcgtggagcgaatacaaaaccttgccggatttgctaag
caatcagatcaagttcagcaactcttgaaacgtacacatcagttgggtttattgaggaac
aattacgcaaacatggtttctgacaactccaacgcgcgcttatttcaggtggagctatgt
aaaagtatttctgaattattacttaatcatttaaaatccgataccgataccgtaaccatg
acccatgcctgggctatgtataaccgggctcgaaaaactgaacttgtttctccagctgac
tttgcaaaagcctgcgaacttttttctaaccttgacttaggaatttccgtttccaagtta
tcatctggagcattgttatttcagctcaaacttcccaatcaaaaagaaaaattcctctct
gccttaatgcagacaatgcagccaagtataacgatctcacaatgcgctatgaagctgcat
tggtctattggagtgaccatggaacagcttgaatcagcagaatcagagggctatatcgta
agagatatccatgaagatattggatttggagttcagtattggaagaatcaatttcaatct
tttgagagcgaactaagccatcttctattttcatctcaaaacaacatatga
DBGET
integrated database retrieval system
