KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_00488
Entry
SOMG_00488        CDS       T09274                                 
Symbol
mnh1
Name
(RefSeq) exon junction complex subunit
  KO
K12877  protein mago nashi
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013  Nucleocytoplasmic transport
som03015  mRNA surveillance pathway
som03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SOMG_00488 (mnh1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    SOMG_00488 (mnh1)
   03015 mRNA surveillance pathway
    SOMG_00488 (mnh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:som03019]
    SOMG_00488 (mnh1)
   03041 Spliceosome [BR:som03041]
    SOMG_00488 (mnh1)
Messenger RNA biogenesis [BR:som03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SOMG_00488 (mnh1)
Spliceosome [BR:som03041]
 Complex C
  Other components
   EJC/TREX
    SOMG_00488 (mnh1)
SSDB
Motif
Pfam: Mago_nashi Ig_6
Other DBs
NCBI-GeneID: 80873971
NCBI-ProteinID: XP_056035682
UniProt: A0AAE9W929
LinkDB
Position
1:join(1059262..1059290,1059346..1059383,1059452..1059478,1059561..1059614,1059668..1059731,1059781..1059868,1059957..1060103)
AA seq 148 aa
MSSDFYVRYYSGHYGRFGHEFLEFDYHSDGLARYANNSNYRNDSLIRKEMYVSPLVLKEV
QAIVEESDIIKESDEQWPRKNKDGKQELEIRMNGQHIMFETSKLGSLADVQNSEDPEGLR
VFYYLIQDLKALCFSLISLNFKLRPVKT
NT seq 447 nt   +upstreamnt  +downstreamnt
atgagtagtgatttctacgtgcgttattattcgggtcactatggccgatttggacatgag
tttttggagtttgattaccacagcgatggacttgcccgttacgccaacaattcgaattat
agaaacgattcgctgattcgaaaagagatgtacgttagtcctttagtgttgaaagaagtc
caagcaattgtggaagaaagtgatattattaaagaatctgatgagcaatggcctaggaaa
aacaaggatgggaaacaggaattagaaatccgaatgaacggacagcatattatgtttgag
actagtaaactgggtagtttggcggatgttcaaaatagcgaagaccctgaaggtttgcga
gtattttactatttaattcaagatctcaaagctttgtgtttcagcttaatttctctcaat
ttcaagctgcgaccagtgaaaacatag

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