Schizosaccharomyces osmophilus (fission yeast): SOMG_00502
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Entry
SOMG_00502 CDS
T09274
Symbol
dis3
Name
(RefSeq) exosome 3'-5' exoribonuclease subunit Dis3
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_00502 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00502 (dis3)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
SOMG_00502 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Rrp44_S1
Rrp44_CSD1
OB_Dis3
PIN_4
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
80873985
NCBI-ProteinID:
XP_056035817
UniProt:
A0AAE9W9B3
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Position
1:complement(1084452..1087364)
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AA seq
970 aa
AA seq
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MSAIGYKRPSSSATKDQKPKVFVRAARGKVQKIVRERYLRDDIPCQSKSCPLCISKLPTD
SNGNELEPILSEEPFFLEKFSRHYLIPDTNVFYHCMDALEHPSNFFDVIVLQTVLSEIAS
KSIPLYNRIKRLCQEKTKRFTPFSNEFFSDTYIDKIEGESPNDRNDRAIRTAASWYTGHL
AGLGIKVVLITNDRRNAEIAAEQGIQTSTLKDYVQFLPDSEVLLDMISAVADAAAANEKA
SSETKAIYEHHWSTSRMLTCIKNGEVHKGVLNVSTYNFLEGSINTPGYNKPILISGREYL
NRAVQGDVVCVQILPQSQWKTEAGEIASDDEDVLVNASAEPDASRSIDLETPTSKKAHPT
GKIVGILKRNWRPYVGHVDNTTVAQSKGGSQQTVLLTPMDRRIPKIRFRTRQAPRLLGQR
IVAAIDTWEATSRYPEGHFVRALGEMETKEAETEALLLEYDVQHRPFPKAVLDCLPQEGH
NYKVPADKSDPLWKNRKDFRDLLICSIDPPGCQDIDDALHARVLPNGNFEVGVHIADVTH
FVKPKTAMDSEAASRGTTVYLVDKRIDMLPMLLGTELCSLRPYVERFAFSCLWEMDEDAN
IVNTSFTKSVIASKEAFSYADAQARIDDKNMQDPLTNGMRILLKLSKKLKQKRMDDGALN
LASPEVRIQTDNETSDPMDVEIKQLLETNSLVEECMLLANISVAQKIYDTFPQTAVLRRH
ASPPLSNFDSLQDILQVCKGMHLKCDTSKSLAKSLDECVDPNEPYFNTLLRILTTRCMLS
AEYFCSGTIAAPEFRHYGLATSIYTHFTSPIRRYADVLAHRQLAAAIDYEVLNPSISDKQ
RLIEISNGINYRHRMAQMAGRASVEYYVGQALKGGIAEEDAYVIKVFKNGFVVFIAKFGL
EGIVYTKSMTNMLEPNVEFLEDKYMLKVEIRDPPKPKVVEIQMFQKVRVRVGTVRDEHSG
KQKVDIRLVH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaattggttataagcggccttcatcttccgctacaaaagaccaaaaaccaaag
gtttttgtgcgagctgcacgcggcaaggttcaaaaaattgttcgtgaacgatatctacgt
gatgatattccctgccaaagtaaaagctgcccattatgtatttccaagcttccaacggat
tcgaacggaaatgaattggagccgatattgtccgaagaacccttctttttggagaagttt
agtcgtcactatttgattcctgataccaacgttttttatcattgtatggatgctttggaa
catccttccaattttttcgatgtgattgtcttacaaactgttctttctgaaatagcctcc
aagtcgattcctctttacaaccgtattaagcgtctgtgtcaagaaaagaccaaacgcttt
actccttttagtaatgaattcttttctgatacgtatattgataaaattgagggagagtcg
cccaacgaccgaaacgacagagccattcgtactgctgcttcttggtatactggtcacttg
gccggattagggatcaaagtcgtgctaattacaaacgaccgccgcaatgcagagatcgcg
gctgaacagggtatacagacttctactttgaaggactacgttcagttcttaccagactca
gaggtcttgctggacatgatatctgcagttgccgatgccgccgctgctaatgagaaagca
tcttccgaaacaaaggccatctacgaacaccactggtctacttctcgtatgcttacctgt
ataaaaaatggagaagtccataaaggtgtgctaaacgtaagcacctataactttctcgaa
ggctctattaatacaccgggatacaataaacctattttaatctctggaagagaataccta
aaccgtgcagtccaaggtgatgttgtatgtgtccaaattttacctcaaagtcaatggaag
acagaagcgggagaaattgccagcgatgatgaagatgtattagtgaacgcttccgctgag
cccgatgcttctcgtagtattgatttagaaactcctaccagtaagaaagcacaccctact
ggaaagattgttggtattttgaaacggaactggagaccctatgttggacatgttgataat
accactgtagcccagtccaagggtggttctcaacaaacggtactccttactcccatggat
cgtcgtattcctaagatccgttttcgcactcgacaagcccctcgactacttggtcagcgg
attgtagccgctatcgatacttgggaggctactagtcgttatcccgaaggtcattttgtc
cgtgctcttggtgaaatggaaaccaaggaggccgaaacagaagctctgttacttgaatat
gatgtacaacaccgaccattccctaaggccgtattggattgtctccctcaagaaggccac
aactacaaggtaccagctgacaaatctgatcctctttggaaaaacagaaaagactttcga
gatcttttaatttgtagtattgatccccctggatgtcaagatattgatgatgctctccat
gcacgtgtcttaccgaatggaaactttgaagtgggcgtgcacattgctgatgtaacccat
tttgtgaaaccgaaaacggcgatggacagtgaagccgcttcccgtggtactactgtttat
ttagttgacaagcgtattgatatgcttcctatgttgttgggtacagagctttgttctttg
cgtccttacgtagaaagatttgcattctcttgtctttgggaaatggatgaagatgctaac
attgttaatacttcatttacgaaatccgtgattgcttcgaaagaggcatttagttatgca
gatgcccaagcccgaattgatgataagaatatgcaagatccattaacaaatggcatgcga
attctgttaaaactatctaaaaagttaaaacagaaaagaatggacgatggtgctttgaat
ttggcgagcccggaagtaagaatccaaacagacaatgaaacatcggacccgatggatgtt
gaaataaaacaactgcttgaaacgaactctcttgtcgaagagtgtatgttattagccaat
atttctgttgctcaaaagatttacgatacattccctcaaactgctgttcttcgtcgacac
gcatcaccacctctttctaactttgattccttgcaagatatcttgcaagtatgcaaggga
atgcatcttaaatgcgatacatcaaaatccttggcaaaatctttggatgaatgtgtggat
cccaacgaaccctactttaataccttactgcgtatactgacaacccggtgtatgctatca
gctgaatacttttgctctggtacaatagcagctcctgaattccgccactacggtttggca
accagtatttatacacattttacttctcctattcgtcgttacgcagacgttttggcacat
cgacaattggcagcagctattgactacgaagtgctaaatccttccattagtgacaaacaa
cgcttaattgagattagcaatggtataaattaccgtcatcgtatggcacagatggctggc
cgtgctagtgttgagtattatgttggacaggcgctaaaaggaggaattgctgaagaagat
gcgtatgtaattaaggtttttaagaatggttttgttgtatttattgccaagtttggtctt
gaaggtattgtatatacaaagagcatgacgaacatgttggaacccaacgttgagtttttg
gaggataaatatatgctgaaagtggaaattcgggatccaccaaagcccaaggtggtcgag
attcaaatgtttcaaaaagtacgagtgcgtgtgggtacagttcgtgatgagcattcagga
aaacaaaaagtagatattcggttggtgcactaa
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