Schizosaccharomyces osmophilus (fission yeast): SOMG_00545
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Entry
SOMG_00545 CDS
T09274
Symbol
ptr3
Name
(RefSeq) ubiquitin activating enzyme E1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SOMG_00545 (ptr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
som04121
]
SOMG_00545 (ptr3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
som04147
]
SOMG_00545 (ptr3)
Enzymes [BR:
som01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
SOMG_00545 (ptr3)
Ubiquitin system [BR:
som04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
SOMG_00545 (ptr3)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SOMG_00545 (ptr3)
Exosomal proteins of other body fluids (saliva and urine)
SOMG_00545 (ptr3)
Exosomal proteins of colorectal cancer cells
SOMG_00545 (ptr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_4HB
E1_FCCH
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
80874028
NCBI-ProteinID:
XP_056036604
LinkDB
All DBs
Position
1:complement(join(1170505..1173540,1173601..1173606))
Genome browser
AA seq
1013 aa
AA seq
DB search
MSNKMNIDQTGSGTIDEGLYSRQLYVLGHEAMKQMSQSDVLIIGCKGLGVEIAKNICLAG
VKSVTLYDPQPTHIEDLSSQYFLTEDDLGVSRADVSVPKLAELNQYVPVSSTPELSIQDL
KKYKCVVVTETSLTKQLEINDFTHENRIAFISTDSRGLFGSVFCDFGPEFVCTDVDGNEP
LTGMIANITDDGTVTMLEETRHGLEDGDYVKFTEVKGVPALNNGQPRKVEVKGPYTFSIG
SINGLGGSAATGGVFTQVKMPQKLTFKSLRESLKEPEYVFPDFGKMLRPPQYHVAFQALS
SFAETHNGVLPRPRNNADAGEFLQIAKKIGASFDSQLELDENLIKEVSYQARGDLVAMCA
FLGGIVAQEVLKSTTSKFFPFKQFFYFDSLESLPTSVQLSEEACKPRGTRYDGQIAVFGS
EFQQKLSSLKQFLVGAGAIGCEMLKNWSMMGVSTGEDGHIHVTDMDSIEKSNLNRQFLFR
ARDVGKLKAESAANAVAAMNPSLTGKITSYQERVGPESEGIFGDEFFDNLSIVTNALDNV
EARLYVDRRCVFFEKPLLESGTLGTKGNTQVVVPHLTESYGSSQDPPEKSFPICTLKNFP
NRIEHTIAWARDLFEGLFKQPIDNVNLYLSSPNFLETTLKTSSNPREVLENIRDYLVSEK
PLSFEECIIWARGQFEKFFNHNIQQLLYNFPKDAVTSNGQPFWTGPKRAPSPLAFDINNR
AHFDFIVAAASIYAFNYGLKEETDPALYERVLSSFKPAEYSPKSGVKIQVNESDEAPEAA
ANSDKQELKSIADSLPPPSSLAGFRLTPADFEKDDDTNHHIDFITAASNLRALNYEITTA
DRFKTKFVAGKIVPAMCTSTAVVSGLVCLELVKLVDGKKKFEDFKNGFFNLAIGLFTFSD
PIGSPKMKFNEKEVDKIWDRFNLPNFTLQNLIDHFSEKEGLEVTMLSSGVSLLYANFQPP
KKLAERLPLKISDLVEQISKKKLEPFRKHLILEVCCDDKDGEDVEVPFITVKV
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaatgaatattgaccaaacggggtcaggcaccattgatgagggattatac
tcccgacaactttatgttttgggccacgaagccatgaagcaaatgagtcaatcagatgtt
ttaattatcggatgcaaaggtctcggtgttgaaattgctaaaaacatatgtctcgctggt
gtcaaaagcgttacgctatatgatcctcaacctactcatatcgaggatttgtcttcacaa
tactttttgaccgaagatgatttgggcgtttctcgtgctgatgtcagtgtgccaaaatta
gctgaacttaaccaatatgttcccgtgtcttcgactccagagctgtcgattcaagatttg
aaaaaatacaagtgtgttgttgttactgaaacttctctcacaaaacaactggaaattaat
gactttactcatgaaaacagaattgcatttatctctacagatagccgcggtctttttggt
tccgtgttttgcgactttggaccagaatttgtctgcactgatgtggatggaaacgaaccc
ttaactggaatgattgcaaatattactgacgatggcactgttacaatgcttgaagaaacc
cgccacggtttagaagacggtgattatgtgaagtttactgaagtcaagggtgtgcctgct
ttgaacaacggccagccccgcaaagtagaagttaagggcccttacaccttttctattgga
tctattaatggtttgggcggttccgctgcgactggtggtgttttcactcaagtcaaaatg
cctcaaaaacttactttcaaatctcttcgtgagtctttgaaggaacctgaatatgtattt
cctgattttggaaaaatgctgcgtcctcctcaatatcacgttgccttccaagcactttct
tcgtttgctgaaacacacaacggcgttttgcctcgccccagaaacaatgcagacgctggc
gaatttcttcaaattgcgaagaagatcggtgcttcttttgattcgcagttagaactggat
gaaaaccttattaaagaagtttcttatcaggccagaggcgatcttgtcgccatgtgcgct
ttccttggtggtatagttgctcaagaagttttgaagtctactactagcaaattcttccca
tttaagcaatttttctactttgattcccttgagagtcttccaacctctgtgcaacttagt
gaagaagcttgtaagcctcgtggcactcgttacgatggtcaaattgcagtttttggaagt
gaatttcaacaaaaattgagctccttaaagcaatttttggttggtgctggtgccattggt
tgtgagatgttgaagaattggtctatgatgggtgtctccactggcgaagatggtcatatt
cacgttactgatatggattccattgaaaaatcaaacttgaaccgtcagttccttttcaga
gctcgcgatgttggcaagttgaaggctgaatctgctgctaatgctgttgctgccatgaat
ccttctttaactggcaaaattacctcttatcaggaacgtgtcggaccggagagcgaaggc
attttcggagacgaattttttgataacctttctatagtgactaatgctctggataacgtc
gaagctcgtttgtacgtcgatcgccgctgcgtgttctttgaaaagccattgttggagtct
ggtactttaggtacaaaaggtaatactcaagtggttgtccctcacctcactgaatcctac
ggttcatcccaagatcctcccgagaagtctttccctatctgcactctcaagaactttcct
aaccgcattgagcatacaattgcttgggcacgtgatttattcgaggggttatttaagcaa
cctattgacaacgtgaacttgtacctcagttcccccaatttcttggaaacaaccttgaaa
actagcagtaaccctcgtgaagttttagaaaacattcgcgattaccttgttagcgaaaag
cctctctcctttgaggaatgtatcatttgggctcgtggccaatttgaaaagttctttaat
cataacattcagcaattactttacaacttccccaaggacgctgttacttcgaatggacaa
cctttctggactggtccaaagcgtgctccttctcctttggcattcgacattaacaatcgt
gctcactttgatttcatcgtcgctgctgccagcatttatgctttcaattacggtttgaag
gaggaaactgatcctgctctttatgaacgggttctttctagcttcaagcctgctgaatat
tctcccaagagcggtgtgaagattcaagttaatgagtctgatgaggcaccagaagcagct
gctaattccgataagcaagagttaaaatctattgctgatagcttacctcctccatcttct
ttggctggctttagattgacacctgcagattttgaaaaagacgatgacaccaaccatcac
attgattttatcactgcagcttccaaccttcgagctttgaattacgaaattacgactgct
gatcgttttaagacaaaatttgttgctggcaagattgttccagctatgtgtacttctact
gctgttgtttctggtttggtttgcttagaattggtgaagttggtagatggtaagaaaaag
tttgaagactttaagaatggtttcttcaatcttgctattggacttttcacattctcagat
cctattggatctcccaagatgaagtttaacgaaaaggaggttgacaaaatctgggaccga
tttaatcttcccaactttaccctccaaaaccttatagaccacttttctgaaaaggagggc
ttggaagtcactatgctctcttctggtgtttctttgctttacgctaatttccaaccaccc
aaaaaacttgcggagcgtctacctcttaagatatctgatttggttgagcaaatttccaag
aagaagctggagccatttagaaaacacttaattttagaagtgtgttgcgatgacaaagac
ggtgaagatgttgaagttcccttcattactgtcaaagtataa
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