Schizosaccharomyces osmophilus (fission yeast): SOMG_00546
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Entry
SOMG_00546 CDS
T09274
Symbol
mtr3
Name
(RefSeq) exosome subunit Mtr3
KO
K12587
exosome complex component MTR3
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_00546 (mtr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00546 (mtr3)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SOMG_00546 (mtr3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
80874029
NCBI-ProteinID:
XP_056036605
UniProt:
A0AAF0AVA7
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Position
1:join(1174058..1174172,1174218..1174888)
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AA seq
261 aa
AA seq
DB search
MTDRKRVCGPLVSVPPAFEVPEQPAFTRDRNADNCRKIYLKLGWATKAMGSAYYESGKIK
IGCNVYGPRPNKTFSFQNVAKLNCEVKYSPFSLPERKGHVQSAEEKDYGFLLETALSPSI
LLHLYPKSSIDVYVQILESDGTMATLAAAITCASAAIADANIECIDLVTGVSLLYKIQGP
EYWVDPDFMDECGRPRPYGSLVVGHMAALGHITQVWEKGNCTSERLKSLLEKCTETAKGI
RLVINHTLSQEKLGSLVNDTP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccgtaagagagtttgtggtcctctggtctcagtacctccagcatttgaagtg
cctgaacagcctgcgtttacgagggatcgcaatgcggataattgcagaaaaatatacttg
aagcttggatgggccaccaaggctatgggaagcgcttattatgaatctggtaaaatcaag
attggatgcaatgtttatggccctagaccaaacaagacgttttctttccaaaatgtagca
aagttgaattgcgaagtgaagtacagccccttttcattgccagagaggaagggacacgta
cagagtgctgaagaaaaggattatggtttcttactcgagacagctctttcccctagtatc
ctactacacttatatcccaaaagttctatcgatgtttatgtacaaattcttgagagcgat
ggaactatggcaacattggcagctgctattacttgtgcttctgcagcaatcgctgatgca
aacatagaatgcatagatctggttacaggtgtgagcttattatataaaattcaaggacca
gagtattgggtggatccagactttatggatgagtgtggtcgaccacgtccatatggttct
ctagtagttggccacatggctgctcttgggcatattactcaggtctgggagaaagggaat
tgcacttcggaacggctcaaaagtttgctagagaaatgtacagagacggcaaagggaatt
cgtttggtcattaaccatactcttagtcaagaaaaattgggatctttggttaacgataca
ccttga
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