KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_00623
Entry
SOMG_00623        CDS       T09274                                 
Symbol
utp4
Name
(RefSeq) U3 snoRNP-associated WD repeat protein Utp4
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SOMG_00623 (utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:som03009]
    SOMG_00623 (utp4)
Ribosome biogenesis [BR:som03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SOMG_00623 (utp4)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EML WD40_Prp19 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd PEP5_VPS11_N Beta-prop_HPS5 RMC1_N Beta-prop_DCAF4 KNTC1_N Beta-prop_IFT140_1st Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 80874106
NCBI-ProteinID: XP_056035611
UniProt: A0AAE9W8K7
LinkDB
Position
1:1345590..1347719
AA seq 709 aa
MDIHRCRFVEYTPSPITALAFSHQLSSQDPLPSNLHLAVGRANGNIEIWTPKGDWCLKGV
LYGGINRSVEGLAWSVSDEELRLFSIGFSTSITEWNLRTGKPLVHQDSNAGAIWSISLHE
ETKTLAVGCDDGSCVLFDISGGRGVIEYKRTLMRQTSRILSLCWQGKNHIVGGCTDGIVK
VWDVESPNSTIIARMQVDRAKKGSRSLVWDVKPLKDNTIVTADSSGAVKFWNGKYFTLTQ
SFKLHSADALTLAVSSNDNIVFSSGIDRKTVQYTRDGGKREWVSNSFRRFHSHDVRCMSI
LECKTVDVLVSGGADMMLAVVPVRHFNAKHHRMIPAVPQKPRMAIATKARLFMLWEDHQV
LVWRIGSPGYRFLLKIVLPNEENIVHAAISQDGELLAVSTILTTKLYRVHYTDDKVYVES
IEDPFLANVGATLLQFTVDMKKLILISNESDIFLLDLSRIETHQLEVYEVSQPETKKAPS
KYRGSGQSACEGIATVSVSPDGDYFAVADLNGNTFCYSFSTLSYIELPRVNSFVRAMAFR
LDIPGRLAVVTAGNQVFEFDVQSRKLTEWSKTNSNNIPKPFAHLLDKPFGAFFDIQNPSR
FWIWSANYVSFFDLNLDLPAPRNAEKRKMDGTVDGASSTKQRSAVQNATSSSKFGTGASR
SFWITHKYRPMLLAGLVGSTELLVIERPIADILMSTDVPGTFNEHRFGA
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggatattcatcgttgtcgtttcgtcgagtacactccttcacccattactgctctcgca
ttttcgcatcaactctcttcacaagatcctttaccgtctaatttacatttggcagttgga
cgcgctaacggaaatatcgaaatatggacaccaaagggggactggtgtttgaagggtgtc
ctctacggcggtataaatcgaagcgttgaaggtcttgcctggagtgtgagtgatgaggag
ctacgtttatttagtattggattctctacttccatcaccgaatggaatttacgaaccggt
aagccattagtgcaccaagattctaacgctggtgccatttggtctatttcgcttcatgag
gaaacaaaaactttggctgtcggttgtgacgacggtagttgcgtcttgtttgacattagt
ggaggacgtggtgttatagagtataaacgcaccttgatgcgacaaacttctcgtatcctt
tctttatgttggcaaggaaagaaccatattgtcggtggatgtacagatggaattgtcaaa
gtttgggatgttgaaagtccaaattccacaattatagctcgaatgcaagttgatcgcgct
aagaaaggtagtcgttccctcgtatgggatgtcaaacccctcaaagataatacaattgtc
acggcggattcttctggagctgtcaagttttggaacggaaagtattttactcttacccag
tcgttcaagcttcattcggcagatgcactgactctagctgtttcgagcaatgataatata
gtgttttcctctggtattgatcgcaagacggttcagtataccagagatggtggcaagcgt
gaatgggtaagcaatagcttccggagatttcactcacacgatgttcgctgtatgtcaatc
cttgaatgcaaaactgtagatgttttagtttctggtggtgcagatatgatgcttgccgtg
gtgcctgttcgtcactttaacgctaaacatcatcgaatgataccagctgttccacaaaag
cctcgtatggcaattgctacgaaagctcgtttatttatgttgtgggaggatcatcaagtt
ttggtttggagaattggttctccaggttaccgctttctcttgaaaattgttttaccaaat
gaagaaaatattgtccacgcagcgatatcccaagacggagaattgcttgcagtatctaca
attctgaccactaagctctaccgtgtacattacaccgatgacaaagtttatgtggaaagt
attgaagatccctttttagcgaatgttggagcaaccttgttacagtttacggtagacatg
aagaaactcattttaattagcaacgaatctgatattttcttgcttgacttgagtcgaatt
gaaactcatcagcttgaagtttatgaggtatcccaaccggaaactaagaaagcaccttcc
aaatacagaggaagtggtcaaagcgcatgcgaagggattgctactgtctccgtatctcca
gatggcgattatttcgctgttgctgatttgaatggaaatactttttgttactcattttcg
accttgtcctacattgaattacccagagttaacagttttgtacgagccatggcttttaga
ctggatattcctggacgtttggctgtggtgacagcaggtaaccaagttttcgagtttgat
gttcaaagtcgaaagctgaccgagtggtccaagacaaattcaaacaatataccaaagcca
tttgcccatttattggacaagccctttggtgcattctttgatatacaaaatcctagccga
ttttggatctggtcagcaaactacgtatctttctttgacttaaatttagatcttccagcc
cctcgaaatgccgaaaaacgtaaaatggacgggactgttgatggtgcttcgtcaacaaag
caacgctctgctgttcagaatgctacatcttcatccaagtttggaactggtgcctcaagg
tcattttggatcacacataaatatcgtcctatgttattggctggcttagtaggatcaact
gagcttcttgtaatagagcggcccatagctgatatattaatgagcacggatgttccaggt
acatttaacgagcatagatttggcgcttga

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