Schizosaccharomyces osmophilus (fission yeast): SOMG_00690
Help
Entry
SOMG_00690 CDS
T09274
Symbol
rav1
Name
(RefSeq) RAVE complex subunit Rav1
KO
K24155
rabconnectin-3a
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
SOMG_00690 (rav1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_00690 (rav1)
Membrane trafficking [BR:
som04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
SOMG_00690 (rav1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
SOMG_00690 (rav1)
RAVE complex
SOMG_00690 (rav1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
pPH
DUF7961_N
DUF7165
Motif
Other DBs
NCBI-GeneID:
80874173
NCBI-ProteinID:
XP_056034799
UniProt:
A0AAE9W5A7
LinkDB
All DBs
Position
1:join(1503414..1503500,1503567..1507361)
Genome browser
AA seq
1293 aa
AA seq
DB search
MPLAFVNPGTPLEGASTKDYVYWKKKRVLSLGTACSIAIIVNNYEHYQSIQLDQSVSAIA
LNRRGAALAVSYSDFVTVYLPDEQWHWEHYLTYKVSGNSCIQTLSWGYNLDLLVCTNKNL
CILDFSDEQVRVLWSLDSASGIPFVGSSLSSDACYIASVEKSNPLAKVWLRSSPQGTVTS
LYDFSYLPHPVPIRFYSWSRPLHPDSSSSLPFFYTVGFDHVLRIWQTGSRFGSQLMHLSC
CLDLKEYTDKNSAPFCFLLERDDFTAALAHAISRYSGNLPDDPVLPKLVGLANSHPQLFF
IFSDSKVHIFSFHMDEDCLTTAKLVRSVPVRFPRNALPPDGFLTVYRTIKEDVYDYKFII
RFQDFANEYAFKLSGIYSDEEFALHTTQMFYGHDTSIKTLVRTSNGHGIASCDNQRICML
QSYLSSDSHRSLVRRSKLRLEGNDFVLPLHAGEYAVTVNNSTIKLWHCDNTFAPVLLCSS
SKVPTSEIITFFILPVQKNRISVLCALTEGGHAWFYNVLLDNHESSKLEFLDRVGFAPNV
HTASAVDVMGWSSTLSLSSLESFEREVFVSISDDGLLQTWMAKVSGPSNATISEFSRVQT
NIKSADMVKGSTSRKVAVVSENRLRLSIFDTGSSFFTANQEFTNTFNIYGPIIDLDWTST
PNSHSILAIGFQHDVILLCQNRRSYISDASCWVPIRRYNLSMYTDMLISDSSWLDNGTLV
TAAGNNLFFFKSKLPNNKSLLFPSALKRTANNIFDLAYQLNGILPVFHPQFLQQLLLRNE
EYLVRKILLLFYISLKNDHPMHYLLNMECSELYEHDDEKLMNSFYEALMKYANEVIIKTD
FSGEKPSVSENPTAYLDAFTTDLCYLLKHKKVKTLTRSSQFYLLNVIEACCKADQLRDSL
DLNGRRFCIMLNQYILNKYQRRSNRFPTRDVLWAFYSTNKSVLLDYTVKAHGKTLLWPAV
EEYGLPFWLNQQALKNVFEELSRNHYVDNDDRDPEKVSLYHIALGKLSVLRKLWSLAGWS
KESRPTVKFLSNDFTQNRWKIAASKNAFALLSKHRYFYAAAFFLLADSPYDAAKVCIRNL
HSLSLAVAVVRTYEGNGKSCLKRIIEEFVLPSAAYYNDRWLANWGFAMLNDKLKSIKSLL
VPLRSLIEVDNDLIESFEMDNHVGETHGGTEIAEESHGKAKNEYTSDDPALILLYDFLRG
DVLQRDQMLEYRFVLNSARVYNEMGCDVIALDLLRNWKFEFPSSLPSREPIEEEATSKEE
PEAIATENKTTIMGQELKPAPAEVPEFDESFFF
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggcttttgttaatccaggcactccgttagaaggcgcttctaccaaggattat
gtttactggaagaaaaagcgtgttttgtctttaggcacagcttgctctatcgccattatt
gtaaataactatgagcattaccaaagtatacaactcgatcaaagtgtctctgccattgcg
ttaaatcgtcgtggtgcagccttggcagtatcgtattcggacttcgtaactgtgtacttg
ccagatgagcaatggcattgggaacactatcttacatataaggtgtctggcaatagttgt
attcagactctatcctggggatataatttagaccttttagtctgtacaaacaaaaactta
tgcatccttgatttttctgatgagcaagtccgtgtactgtggtccttggattcagcatca
ggcatcccttttgttggatcaagtctatcgtccgatgcttgttacatcgcatctgttgaa
aaaagcaatcctttggctaaagtctggttaagatcatctcctcaaggaaccgtaacgtcg
ttatacgattttagttatcttcctcatccagtacccatacggttttactcgtggtctaga
ccattacatccagattctagcagttctctcccttttttttacacagttggttttgatcat
gttttgcgcatatggcagaccggtagccgatttggctcgcagctcatgcatctttcatgt
tgtttagatttgaaggaatatactgataaaaactcagcaccgttttgttttttacttgaa
agggacgattttacagctgctttggctcatgccattagtcgctactcgggcaatttgcct
gatgaccctgttcttccaaagctggtaggtctggccaattcacatccacaattgtttttc
attttttctgattccaaagtacacatattttctttccacatggatgaagattgtcttacg
actgctaaacttgtaaggagtgttcctgtcaggtttccacggaatgctttaccaccggat
ggatttcttacggtgtatagaaccataaaagaagatgtatacgattataaatttataatt
cgttttcaggatttcgccaacgagtatgcctttaaattatcaggtatatattcagatgag
gagtttgcgctacataccactcaaatgttctatggacatgacacttctataaaaacactg
gttagaacatcaaatggacatggaattgcttcttgtgataatcaacgcatttgcatgcta
caatcgtacttatctagtgatagtcataggtcattggtgcgacgatcgaaactccgttta
gagggaaatgactttgttttaccgttacatgccggtgaatatgcagtaactgttaataac
tccactataaaactttggcattgcgataacacgttcgctcctgtattactttgttccagt
agcaaagtccctactagtgaaattatcacattttttattttgcctgtgcaaaaaaaccgt
atttctgtgttgtgtgcactaacagaaggtggtcatgcttggttttataatgtactatta
gataatcatgaaagctcaaaactcgagtttctagatcgagtagggtttgcccctaatgtt
cacactgcttccgccgttgatgttatggggtggtcctcaacattaagcctaagcagttta
gaatcgttcgaacgagaagtatttgtatcaatatctgatgatgggttgcttcagacctgg
atggcaaaagtttcaggaccttcgaatgcaaccatatccgagttttctagagtacaaacg
aacatcaaatccgcagacatggttaagggctccacttcgagaaaagtagcggtggtttca
gagaaccggcttcgcttgtctatttttgatacagggagctctttttttaccgccaatcaa
gaatttaccaacacttttaatatttatggaccaataatagatttagattggacttcgacc
cccaactctcattccatccttgctataggttttcagcatgatgttatcttattatgtcaa
aaccgccgatcttatattagcgatgcttcttgttgggtacctattcgacgttataatttg
agtatgtatacggacatgcttattagtgattcttcctggctagataatggtaccttggtc
actgccgccggaaataatttattttttttcaaaagcaagcttcctaataataaatctcta
ctatttccttccgccctaaaacgaacagcaaataatatctttgatcttgcttaccaactg
aatggtattttaccggtatttcacccgcaatttttgcagcagctcttgctcagaaacgaa
gaatacttggttagaaaaattctattgctgttctacatttctttaaaaaatgatcaccct
atgcactatttgttgaatatggagtgttcagagttatacgaacatgatgacgaaaaatta
atgaattcattctatgaagccttaatgaaatatgccaatgaagttataattaagacggac
ttttctggtgagaagccatctgtttccgaaaatcccacggcctatttggatgcatttact
acagacttgtgttaccttttgaaacacaagaaagtgaaaactttaacacggtcttcacaa
ttttatctactcaatgtgatcgaggcgtgttgtaaagctgatcaacttcgagattcattg
gatttgaatggtagaagattttgtattatgctgaaccaatatattttaaacaagtatcaa
cggcgatcgaatcggtttcctacccgtgatgttttgtgggcattttacagtactaataaa
agtgtgttgcttgactacacggtaaaagctcatgggaagaccctgctatggccggccgta
gaggaatacggattacctttttggctaaatcaacaagcattaaaaaacgtctttgaggaa
ttgtctagaaaccactatgttgataacgacgatcgggatcctgagaaagttagtttatac
catatagcacttggcaagctatcagttttacgaaaactttggagcttggctggctggagt
aaagaatcgagacctacggtgaaattcctctcaaatgatttcacacagaaccgatggaag
attgcagcatccaagaatgcatttgcgcttttgagtaagcatcgctacttttatgcagcc
gcattctttcttctggcagacagtccgtatgatgcagctaaagtttgcattcgcaatttg
catagtttatcactagctgtggctgtggtgcgaacgtatgaagggaatgggaaaagctgt
ttaaaaagaattatcgaagagtttgtattgccctcagcagcatattacaatgatcgttgg
cttgcaaattggggtttcgcgatgttaaatgacaaactgaaatcaatcaaaagtctgctt
gttccactacgatcgctcattgaagttgacaacgatttgatagagtcctttgagatggac
aaccatgtaggtgagacgcacggagggacagagatcgcagaagagagtcatggaaaagcc
aagaatgagtatacgtcggatgatcctgcattaattctactgtacgactttctgcgaggc
gacgtactgcaaagggaccaaatgctcgaatatcgatttgtcctcaatagcgctcgtgtc
tataatgaaatgggatgcgacgtaattgctcttgacttgctacgcaattggaaatttgaa
tttccttcaagtcttcctagtagggagccaatcgaggaagaagctacgagcaaagaagaa
cctgaagcaatagccacagaaaacaagactacaataatgggccaagagcttaaaccagcg
ccggcagaagtaccagaatttgatgaatcatttttcttttaa
DBGET
integrated database retrieval system
