Schizosaccharomyces osmophilus (fission yeast): SOMG_00703
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Entry
SOMG_00703 CDS
T09274
Symbol
ppk26
Name
(RefSeq) PAN complex protein phosphotransferase subunit Ppk26
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_00703 (ppk26)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00703 (ppk26)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SOMG_00703 (ppk26)
mRNA degradation factors
3'-5' decay
Pan complex
SOMG_00703 (ppk26)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
80874186
NCBI-ProteinID:
XP_056036244
UniProt:
A0AAF0AU06
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All DBs
Position
1:join(1525743..1525833,1525881..1525978,1526037..1526080,1526142..1526295,1526338..1526430,1526488..1526632,1526671..1526820,1526872..1526982,1527020..1527248,1527292..1527823,1527874..1527951,1528007..1528054)
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AA seq
590 aa
AA seq
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MDEFRSSSGSPKVGENIQTSPKYPFAAESKDHPSRTKRSLCRNILLYGNCKYSESGCMFR
HDNPLLPQSSTPEQSFSRKKLNAASASFQPKSSLSSKAANAAVFVPKTQEPPMFLSRDRT
PLAISSTKNTINPYANPGILGADGMYSNDAYYSQQNQLKLTRFHLYNPQPSTLPTLRPYD
RNVNDLFIEDNIREELERNTEASRQTLHALPSIVSNYTSLSPLNKKLYRYKEDLGFNVWT
YQATCTTDKNTYVLRRLQDCPNLVDLNAVETLKRIFHPNIVTFYNGFNSDTFNDQSLILV
YDYHPRCSTLKEMYFDGTSAVDKSQTERPMPDEKEQWNYMFQMAIAISHLHKNGLACNHL
TPSRILINRDKRIRINSCADYELAVPIKPPLESRQQQDLKDFGCIIANLATGSLDDDMAK
AARHINHSYSRDFYKAVLSFISDEPVKKNIDSFFKDYAVYFLSVMDASFKENAAMEKRLS
QTIQHKRFFQILYKLMYITDCNDRPAVLPGFRDRKIYLLHLLRDYLFHQVDEGQCPLIDL
CQVLTTLGKLDAGIGQSVALISRDELDCASVTYSELKAWIDDVFELEINL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatttcgttcttcatctgggtctccaaaggtaggagaaaatatacaaacatct
cccaaatatcctttcgcagctgaatcaaaagatcatccctcacggacaaagcgtagtttg
tgccgaaatattttactttatgggaattgtaaatactctgaaagtggctgtatgttccgt
cacgacaatccgttattgccccaaagcagtacaccagagcagtctttttctagaaaaaaa
ctgaacgctgcttctgcatcgtttcaacctaagtcatcgctttcttcgaaagctgctaat
gctgctgttttcgtccctaaaactcaagaacctcccatgtttctttctcgtgaccgaacc
ccattggctatttcttctactaaaaatactataaatccgtatgcaaacccaggaatactt
ggggcagatgggatgtattcaaatgatgcttattattcacaacagaatcaacttaaacta
acacgttttcatctttacaatcctcaaccgtctaccttacctactcttcgtccttacgac
agaaatgtaaatgatttatttatagaagacaatatcagagaagaacttgaacggaatact
gaagcttctcgtcaaacattgcatgcattgccctctattgtttctaactacacgtctctg
tcacctttaaacaaaaagctatatcgctataaagaagacttgggctttaatgtttggaca
tatcaagctacttgtacaactgataaaaacacttacgtcttaagaagattacaagattgt
cccaatcttgtggatttaaatgcagttgaaactttgaagcgcatatttcatccaaatatt
gttaccttttacaatggttttaattccgatacttttaatgaccagtctttaatacttgtg
tatgattatcatccacgatgctctactttaaaagaaatgtactttgacgggacctctgca
gttgataaatctcagactgagcgtccaatgccagatgaaaaagagcagtggaattacatg
tttcaaatggctatcgctatttctcatttacacaaaaacgggttggcatgtaaccacttg
acaccttcaagaatactcataaaccgcgataagagaatccggatcaatagttgtgctgat
tacgaattggcggtaccgatcaaacctccccttgaaagccggcaacaacaagacctaaaa
gatttcgggtgtattatagccaacttggctactggaagtttagacgatgacatggccaaa
gctgctcggcatatcaatcattcctattcgcgcgatttttacaaagcagtcttatctttt
atctctgacgaacctgtgaagaaaaacatcgacagtttttttaaagattatgcggtttat
tttctttctgtaatggatgcttcctttaaagaaaatgctgcaatggaaaagcgactttca
cagactatacagcataagcgtttctttcaaatactgtataaacttatgtatatcaccgat
tgcaatgacagaccagcggtattaccaggttttcgagatcgaaaaatttacttgttacat
ttattgcgcgactatttatttcatcaggttgatgaagggcaatgtcctcttattgattta
tgtcaggttttgactactctgggaaagttggatgctggaatcggccagtcagtagcttta
atttcgagagacgaattagactgtgcgtctgttacttactcagagctgaaagcttggata
gatgatgtttttgagttagaaattaatctctga
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