Schizosaccharomyces osmophilus (fission yeast): SOMG_00716
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Entry
SOMG_00716 CDS
T09274
Symbol
mlh1
Name
(RefSeq) MutL family protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03430
Mismatch repair
som03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SOMG_00716 (mlh1)
03460 Fanconi anemia pathway
SOMG_00716 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_00716 (mlh1)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
SOMG_00716 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
80874199
NCBI-ProteinID:
XP_056036457
UniProt:
A0AAF0AVS0
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Position
1:complement(join(1552577..1554278,1554327..1554499,1554554..1554691,1554767..1554844))
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AA seq
696 aa
AA seq
DB search
MKEDEYQTRRIRPLNPAVVNKIAAGEIIERPENAVKELLENALDAGSTSIEVLLKDGGLK
LLQISDNGAGIHYDDLPYLCQRFSTSKLEKFEDLQQIQTFGFRGEALASISHVAKVTITT
KREGDLHAWRAFYVDGKLAPAAPHNTSAPQPCAGKQGTVITVEELFYNVPGRKAALKHGS
EEYRRVLNLMQKYAIHSEMVSFSCKKVGETVASISLSSRLSTKDKIRHVYGTLAVKHLRV
LKIPEGAINVESFHADGLVSSADYEDKKSIFIVFINNRLVESIELKNAVDETYSKFLHKG
ASYFVYLSLSMKPEQLDVNVHPSKRIVHFLYDHEIIGAISDKLVELLENTDEQRSYSMQT
TIPSITMVKTPELLTQKNKKIYENNMVRTDPREQSIKAMFSSPKKTATLNSNKQNSPTKE
MGNEGTPAEPLMHPSPSFEGALEEDAREKSEDQTVIPCELESIRQLQNEVLNSMHLLATN
ILSEHKYVGLVCPYKRIAAIQHNIGLYLVDYGKLAYFLFYQICLSEFANYGKIYMNPPIP
LDKILAISFTNEDHEFSEKTRKLLMARRDMLNEYFSVDISAEGFLSAVPCLSKGYKPFLN
RLPLFLKDIAPNRIDWLDERSCLEGVMKALAKLYVPLRLSPENTASEDILYMERILEEFF
FPEFRRRLICPKELFEQMAIFQVASLPRLYTVFERC
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagatgaataccagacgagacgaataaggcctttaaatccggctgttgtaaat
aaaattgctgctggtgagattatagaacgtccagaaaatgccgttaaggaattgttggaa
aatgctttggatgctggaagcacgtcgatagaggtcctgttaaaagatggtggattaaaa
cttttacagatttcagataatggtgcagggattcattatgatgatttaccttacctttgt
caacgttttagtacatcaaaattagaaaagtttgaggatttgcaacaaatccaaacattc
ggatttcgaggtgaagctttggcaagtattagccatgttgccaaagtgacaattacaacg
aaacgtgagggagatttacatgcgtggagagcgttttatgtcgatggtaagctagctcct
gcagctcctcataacacttcagctcctcaaccttgtgccggcaaacaaggcacagtgatt
acggttgaggaacttttttacaacgtacctggcagaaaggccgctctgaaacatggtagc
gaagagtatcgccgggttttgaatctgatgcagaaatatgccattcattccgagatggtg
tcattttcttgcaaaaaagttggtgaaactgttgcgtctatttctcttagctctcgatta
tctacaaaggacaagatccgtcatgtctacgggacccttgctgtaaagcatttgagagtg
ttgaaaattccggaaggagctatcaatgtagagagctttcacgcagatggtttggttagc
agcgctgattacgaggataaaaaaagcatttttattgtattcattaataatcgactcgtg
gaatctattgaattgaaaaacgccgttgatgaaacatattccaagtttctacataaaggc
gcatcctactttgtttatttatctctttcaatgaagcctgagcaattagatgtgaatgtg
cacccttctaaacgaatagttcactttctatacgatcatgaaataattggtgccataagt
gataagctagtagagcttttggaaaatacagatgaacaacgttcttattccatgcaaacc
acaattccaagtatcacaatggttaaaacgcctgaactcctaacgcaaaaaaacaaaaag
atatacgaaaacaatatggtacgcacagaccctagggaacaaagtataaaggcaatgttc
tcttcccccaaaaagactgccactttgaattctaataaacagaattcaccgactaaagaa
atgggtaatgaaggaacgccagctgagcctttgatgcatccgtctccttcatttgaagga
gcactggaggaagacgcgagggaaaaatccgaagaccaaaccgttatcccttgtgaatta
gaaagtattagacaacttcagaatgaagttctgaattcaatgcatttattagctacaaac
attctttccgagcataaatatgttgggctggtatgcccgtataagaggattgcagccatt
cagcataacatcggtttatatctagttgactatggaaagctagcttattttcttttctac
caaatttgtctaagtgaatttgcaaattatggaaaaatatacatgaatcctccaattcct
cttgataaaattttagctatttcatttaccaatgaggatcatgagttttctgagaaaact
agaaagcttttgatggccaggcgggatatgttaaatgaatatttttcggtagatatatct
gctgaagggtttcttagcgctgttccctgtctaagcaaaggttataagccctttttgaat
agattaccgttgtttttgaaggatattgcacctaacaggattgactggctagatgaacgg
tcttgtctagaaggagtcatgaaagccttggcaaaactttacgtacctctaaggctatcg
ccagagaatactgcttctgaagatatattatatatggaacgaatactggaagagttcttc
tttccagaatttcgccgcagactgatttgtcccaaagagctttttgagcaaatggctatt
tttcaggtggccagtctgccacggctgtatacagtttttgaacgttgttaa
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