Schizosaccharomyces osmophilus (fission yeast): SOMG_00721
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Entry
SOMG_00721 CDS
T09274
Symbol
nhm1
Name
(RefSeq) m7G(5')PppN diphosphatase Nhm1
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_00721 (nhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_00721 (nhm1)
Enzymes [BR:
som01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
SOMG_00721 (nhm1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
SOMG_00721 (nhm1)
3'-5' decay
Other 3'-5' decay factors
SOMG_00721 (nhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS
DcpS_C
Motif
Other DBs
NCBI-GeneID:
80874204
NCBI-ProteinID:
XP_056036656
UniProt:
A0AAE9WD00
LinkDB
All DBs
Position
1:complement(join(1562286..1562494,1562548..1562735,1562824..1563029,1563082..1563393))
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AA seq
304 aa
AA seq
DB search
MSEAISIEKIRLLQNFQFEKVLKEDTKNKIITLYGYIENKVALVLLEKTAFDLHCINLQE
IPKYIQETRLVQNNDVFHWYLNTFLQSNDLPSLKTTLIWPAAENHIRKYSAQKRRMVQET
PEIYLRIVKPFIETQRGPQIQWVKNILNHIAEAERIVLEDSDKVNGFLVLPDLKWDRQTM
SALNLMAIVHRNDLASIRDLTLEHLPLLENVRSRVLNDVPKKFPVHKNQLKLFVHYPPSY
FHLHVHIMHVDHETGEGSSVGRAILLDDVIERLQSCKLGFAEKTLTYGIGEQHFLFNDLT
NATE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcaatatctatcgagaaaatcagactgctacaaaactttcaatttgaaaaa
gtcttaaaggaggatacaaagaacaagataataacgctttacggctatatcgagaataag
gtcgcattggtactactagagaagacagcttttgatttgcattgtatcaaccttcaagaa
attccaaagtatatccaggaaactcggcttgtgcaaaacaacgacgtttttcattggtac
cttaatactttccttcaaagcaatgatcttccttctttgaaaactactttgatatggcct
gctgcggaaaatcatattcgaaaatactcggcccaaaagcgcagaatggttcaggaaacc
ccagaaatatatcttcgaattgtcaaaccattcattgaaactcagcgaggtcctcaaatt
caatgggtcaagaacatccttaatcacatagctgaagcagaacgtatagttctagaggat
tcagataaagtaaatgggttccttgttttgccggacttaaagtgggaccgccaaactatg
tctgccttgaatttgatggctattgtccacagaaatgatttagcaagtattcgagatttg
actttggagcacttacccttgttggaaaatgtccgttcccgtgtgctaaatgatgttcca
aaaaaatttcctgtgcataagaaccaactaaaacttttcgttcattatcctccctcttac
ttccatttgcatgttcacatcatgcatgttgatcacgaaaccggtgaaggatcgtcggtt
gggcgtgcgattcttctagacgatgtgattgaaaggctacaaagctgcaaacttggcttt
gctgaaaaaacattaacttacggtattggagaacagcactttttgttcaatgatttaaca
aatgctactgaatga
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