Schizosaccharomyces osmophilus (fission yeast): SOMG_01049
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Entry
SOMG_01049 CDS
T09274
Symbol
nuc1
Name
(RefSeq) DNA-directed RNA polymerase I complex large subunit Nuc1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOMG_01049 (nuc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01049 (nuc1)
Enzymes [BR:
som01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOMG_01049 (nuc1)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
SOMG_01049 (nuc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
80874531
NCBI-ProteinID:
XP_056036869
UniProt:
A0AAE9WAC4
LinkDB
All DBs
Position
1:complement(2293144..2298201)
Genome browser
AA seq
1685 aa
AA seq
DB search
MNIARPISSEVKNVTFGIYDVEQIEKISVKQIVNPVLLDNLNHPTSGGLYDLALGPYLKN
SLCATCHLDERYCPGHFGHIVLPTPAYHPLFFSQMYNLLRSTCLYCHHFKLSKVKVHLYG
CILKLLDNGLLNESQLVENVSLTEAAITKPKSATGTEGGSDSEDSGLGNDDIAKDASTLM
RLRDEYVNHAIAEAKGNVHVDSHTTTILLHERKKVVRSFYRDITSRKQCDNCQSFSPNFR
KEGFAKIFELPLSGKNLQYMAQTGKIRSDVLRDTSKKDTEDEGYEGESDSNDDEGEGIDL
MEEDANPMKKKSKVSAAHGAKYMTSTEVRNHLRRLFGKEGSVLTRLYSHKRGSAATADMF
FLQNVAVPPTRFRPASKVGDEVHENIQNELLTKILQSSIQIAALSKDTNVPKNAEDKEAY
DRGSRAFELLIGAFVQLQHDVNSLIDSNRNPSQMGQSRMVPPGIKQILEKKEGLFRKHMM
GKRVNYAARSVISPDPNIETNEIGVPPVFATKLTYPEPVTLYNFNEMRNAVVNGPHKWPG
ATHIQNEDGTLISLMPLTTEQRTALANQLLTPQSNLISSPYSYSRLVNTNKKVYRHVRNG
DMLILNRQPTLHKPSMMAHKARILPGEKTIRMHYANCNSYNADFDGDEMNMHFPQSANAR
AEAQFIANTDSQYLVPTSGDPLRGLIQDHVVMGVWLTCKDTFYTRDEYQQLLYQALKPDE
TGLFGRIKTVPPAVVAPKIFWTGKQVISTILLNLKPIDRPGLNLRGKAKVAGKYWSPNSE
EGSVLFEDGELLCGVLDKSSFGASSFGIVHSIHELYGADIAGRLLSVLSRLFTAYAQMRG
FTCRMDDLRLGEIGNVWRRELLDGGKGLGREAASEYVGLPSDANLSVLNANLEEVYRDDE
KLQGLDATVKGKMNGLTSSVINKCIPDGLLTKFPKNHMQAMTVSGAKGSNVNVSQISCLL
GQQELEGRRVPVMVSGKSLPSFLPYETSAKAGGFIASRFLTGIAPQEYFFHCMAGREGLI
DTAVKTSRSGYLQRCLMKHLEGLNVEYDHTVRDADGSIVQFFYGEDSLDVTKQKHLTQFE
FSARNYKSLIQKYKVKSVLSSVDSEKASSYAKKALKKPHKYDPVMDKYPPSRYLGSVSEK
FQRAVDDYTQNNPDKLIAGKKESKQDESLLNEAKFKALMQLRYQQSLVDPGEGVGVLASQ
SIGEPSTQMTLNTFHFAGFGAKNVTLGIPRLREIIMTASANIQTPQMTLRLNDDVSKERS
AAFCKEVNKLVLSEVVKQVRVVERISGQGSDEQSKSYAIHLDLYPRKEYEEEYGAQQEEI
ERTVSSTFLRVLNRNIKGYLSKSRQRKSAGDESSPEVGEALRPLENIADAPVEGAAQGSL
EDEDNDATNEKMAARSKQHASYDGPDEGDKDAMRDLKKSQKVEEELDEEDGFKSDESVTD
FKERKQAEKLKASSINEKRSFNIQTAQTVLPNCKNIDFDYQNGEWATVELVFPINTEKLL
MVSLVEAACAQTVVHEISGIARCFPKPAESAMDTVPKVITEGVNLKAMWEFYNEISMNDI
STNDIAAILRIYGVEAARNAIVNEVSAVFGVYGIGVDSRHLSLIADYMTFEGGYKAFNRM
GIEYNTSPLAKMSFETTCHFLTEAALAGDVDTLTNPSARLVMGQVGRFGTGSFDLLTPLV
DSAAN
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgcacgcccgatttcttcggaggtgaaaaatgtcacctttgggatatacgac
gttgaacagattgaaaagatatctgtaaaacagatcgtaaatccagttttgttagacaat
ttaaaccaccctactagtggtggtttgtacgatttggctttaggaccttacttgaaaaat
tcattgtgtgcaacatgccatttggatgagagatactgccctggccattttggccatatt
gttcttcctactcccgcgtatcatcctttgtttttctctcaaatgtacaatttgcttcgt
tctacatgtctttactgccatcattttaagctttcgaaagtaaaggttcacttgtacgga
tgtattctcaaattgttagacaatggtttgttgaacgagtctcaactcgttgagaacgtc
agccttactgaggctgctattactaagccaaaatctgctaccggcaccgaaggtggcagt
gacagtgaggatagcggtctcggtaacgacgacatcgccaaagatgcatctactttgatg
cgcttgcgcgatgaatacgttaaccatgctatcgctgaagcgaagggaaatgttcacgtt
gattctcacactactactattcttttacatgaaaggaagaaagttgtacgttccttttac
cgtgacattacctctcgtaagcaatgtgacaattgccaatcgttctctcccaactttcgt
aaagaaggatttgccaagatttttgagcttcccttgagcggcaaaaatttgcaatacatg
gcacagaccggaaaaattcgttctgatgttcttcgtgacactagcaagaaagatactgag
gacgaaggctatgaaggtgaatctgattccaacgatgatgaaggcgagggcatcgactta
atggaggaggatgctaaccccatgaaaaagaagtccaaggtgtctgctgctcatggtgcc
aagtacatgacctccacagaggttcgcaaccatctacgtcgtctttttggtaaggagggt
tctgtccttacacgcttatactctcataagcgaggctctgctgctactgccgatatgttt
ttccttcaaaacgttgccgttcctccaacccgtttccgccctgcttctaaagtgggcgat
gaagtccacgaaaacatccaaaacgagcttttaacaaaaattcttcaatcatctattcaa
attgctgctttgagcaaggataccaatgttcctaagaacgctgaagataaagaagcttac
gaccgtggttctcgtgcttttgaacttttgattggtgcttttgttcaacttcaacatgat
gttaatagtcttatcgacagcaatcgcaatccttctcagatgggccaatctagaatggtt
ccaccaggaatcaaacaaatccttgagaagaaggagggtttgttccgtaagcatatgatg
ggtaagcgtgttaattatgcggctagatctgttatttctcctgaccccaatattgagacg
aacgaaattggtgttccaccggtctttgctactaagctcacttatcctgagcctgtgact
ctttacaactttaatgaaatgagaaatgccgttgtcaatggccctcataaatggccaggt
gctactcatatccaaaatgaggacggcacccttatttctctaatgcctcttaccactgag
caacgtactgcacttgctaaccaactattaacacctcaaagcaatttaatttcttcccct
tattcttattcccgtcttgtcaacaccaataagaaggtatatcgccacgttcgcaatggt
gatatgttaatcctcaaccgtcaacctactcttcataagccttcaatgatggctcataaa
gctcgcattcttcccggagaaaagactatcagaatgcattatgcaaactgtaattcttat
aacgctgattttgacggtgacgaaatgaatatgcactttcctcaaagtgccaatgcacgc
gcggaagctcaatttattgcaaacactgattcccagtatctagtccctacttcaggtgac
cctcttcgaggtttaattcaagatcacgttgttatgggtgtttggcttacttgcaaagac
acattctatacacgtgatgaataccaacagttgctttaccaagctttgaagcctgacgag
actggactgtttggaagaattaagacagttccacccgccgttgtagctcctaagatattc
tggacaggaaagcaagttatctctactatcttactgaacttgaagcctatagatcgtccg
ggactgaatctgaggggtaaggccaaggttgctggcaaatattggtctcccaactctgaa
gaaggctctgtgttgtttgaggacggcgaattgctttgcggtgtcctagacaagtcatcc
tttggtgcctcttcctttggtattgtacattcaattcatgagctttatggtgctgatatt
gctggtcgcttattatctgttttaagccgtctctttactgcgtacgctcaaatgcgtggc
ttcacttgtcgtatggatgacttgcgacttggtgagatcggtaatgtctggcgcagagaa
cttttagacggcggtaagggtttaggtcgtgaagctgctagtgagtatgttggattgcct
tcggacgctaatctctccgttctaaacgccaatttagaagaagtctatcgtgacgatgaa
aaactacagggcttggatgctactgtgaagggtaaaatgaatggtcttacgtcttccgtt
attaataaatgcattcccgatggattacttacgaaattccccaagaatcacatgcaagca
atgactgtatccggtgctaaaggaagtaatgtcaatgtttctcaaatttcttgtttactt
ggtcagcaagaactagaaggtcgtcgtgtaccagttatggttagcggtaaatcacttcct
tctttcttgccttatgagacttctgccaaggcaggtggctttatcgctagtcgcttcttg
actggtattgctccccaagagtacttttttcactgtatggctggccgtgaaggacttatc
gatacggctgtgaaaaccagtcgctctggttatctgcaaagatgtttaatgaagcacttg
gaaggtcttaatgtagaatatgatcatactgttcgggatgctgatggctcgattgttcaa
ttcttctatggtgaggatagtttagatgttaccaagcaaaagcatcttacgcaatttgaa
ttttctgccaggaattacaagtcattgattcaaaagtataaggttaagtccgttttgtct
tctgttgactctgaaaaagcttcgtcttatgctaagaaggcacttaagaaacctcataaa
tatgatcctgttatggacaaataccctccaagtagatatctggggagtgtttctgagaag
tttcaacgtgctgttgatgattatactcaaaacaatcctgataaattgatcgctggtaaa
aaggagagcaaacaggatgagtccttgttgaatgaagccaagtttaaagcactgatgcaa
ttacgctaccaacaatcccttgtcgatcctggtgaaggtgttggtgttttggctagtcaa
tccattggtgaaccttccactcaaatgacattgaacactttccactttgctggtttcggt
gccaagaacgttactttgggtattcctcgtttgcgtgaaattattatgaccgctagtgct
aacattcaaacccctcagatgactttgcgtttgaatgatgacgtttctaaagaacgctcc
gctgctttctgcaaggaagttaacaagcttgttttatccgaagttgtcaagcaggttcga
gtcgtcgaaagaatatccggccaaggatctgatgaacaatcgaaatcttatgctattcat
ttagatttgtatccccgtaaggagtatgaagaagaatatggtgcccaacaggaagaaatt
gaacgtactgtaagttcgactttcctgcgtgttcttaacagaaacattaagggttacctc
tccaaatcaagacaaaggaaatctgctggtgatgagtcatctccagaagttggtgaggct
ttgagacctcttgaaaatattgctgatgcacctgttgagggtgctgctcaaggatcttta
gaggatgaagataatgatgctaccaatgaaaagatggctgctcgttcgaagcaacatgct
tcttatgatggtcctgatgaaggtgataaggacgctatgcgtgatctgaaaaaatcacaa
aaggtggaagaagaattggatgaggaggatggcttcaaatctgacgaaagcgttactgat
ttcaaggagcgtaagcaggctgagaagttgaaggcttcatcaattaacgaaaagcgatcc
tttaacatacaaacggcacaaacagtcctccctaattgtaagaacattgattttgattat
caaaatggtgagtgggccactgtcgagttggtgttccccataaacactgaaaagttgttg
atggtttcgttagtagaagctgcttgcgcacaaaccgttgttcatgagatttctggaatt
gctcgttgcttccctaagcctgctgagtctgctatggataccgttcctaaggtcatcact
gaaggtgtgaatttgaaggctatgtgggaattttacaacgaaatttctatgaatgatatt
agcaccaatgatatcgctgcaatccttagaatttacggtgttgaagcagcccgtaatgct
attgttaatgaagtttctgcagtctttggtgtgtatggtattggcgtcgatagtcgccat
ctttccttgattgctgactacatgacctttgaaggtggttacaaagcgtttaaccgtatg
ggtattgaatacaacacttcacctcttgctaagatgtcttttgaaactacttgtcatttc
ctcactgaagcagctttagctggtgatgttgatactttaactaatccctcagcacgcctt
gtaatgggccaagttggtcgattcggtactggtagctttgatcttttgactccgctcgtc
gattctgccgctaattga
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integrated database retrieval system
