Schizosaccharomyces osmophilus (fission yeast): SOMG_01069
Help
Entry
SOMG_01069 CDS
T09274
Symbol
lsm4
Name
(RefSeq) Lsm2-8 complex subunit Lsm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_01069 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_01069 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_01069 (lsm4)
03041 Spliceosome [BR:
som03041
]
SOMG_01069 (lsm4)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SOMG_01069 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
SOMG_01069 (lsm4)
Spliceosome [BR:
som03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SOMG_01069 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
80874551
NCBI-ProteinID:
XP_056037233
UniProt:
A0AAE9WB71
LinkDB
All DBs
Position
1:join(2332774..2332776,2332818..2333009,2333058..2333231)
Genome browser
AA seq
122 aa
AA seq
DB search
MLPLTLLNAAQGRPILVELKNGETFNGHLEKCDTYMNLTLHEVIRTMPDGDRFFRLPECY
IRGNNIKYLRIQDEVLEQVGKQQAQQRETRGSRFRGRGQRGRGGYGNMNPSNRRGRGRGG
HY
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttaaccttattaaatgcggctcaaggtaggcctatacttgtagagctaaaa
aacggcgaaaccttcaatggccatctcgaaaaatgtgatacatatatgaacctgactcta
cacgaggttatacggactatgcctgatggtgatagattctttcgacttcctgaatgctat
atccgtggaaataacattaaatacttacgaattcaagacgaggttttggagcaagttgga
aaacaacaagcacagcaacgtgaaactcgtggatcgagattccgtggccgtggacaacgc
ggccgtggaggttatggaaacatgaatccttcaaatcgtcgcggacgtggacgaggaggg
cattattga
DBGET
integrated database retrieval system
