Schizosaccharomyces osmophilus (fission yeast): SOMG_01139
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Entry
SOMG_01139 CDS
T09274
Symbol
vps33
Name
(RefSeq) HOPS/CORVET complex subunit, vacuolar sorting protein Vps33
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04138
Autophagy - yeast
som04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SOMG_01139 (vps33)
04148 Efferocytosis
SOMG_01139 (vps33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_01139 (vps33)
Membrane trafficking [BR:
som04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SOMG_01139 (vps33)
Hops complex
SOMG_01139 (vps33)
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Auxin_inducible
DUF4743
Motif
Other DBs
NCBI-GeneID:
80874621
NCBI-ProteinID:
XP_056035360
UniProt:
A0AAF0ATY9
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Position
1:join(2467101..2467157,2467203..2467881,2467925..2468197,2468254..2469026)
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AA seq
593 aa
AA seq
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MSKDVKESARFYLLDLIDSIAGKKSLLLERELSGILGQIITTNTLQEHGIPQVFWFDSNI
PQELDQKIIYLCRPTYANAKLVSAHVRQHQQNMNQTENTVILLPCTNVLFETVLQEEGVF
GELVIMEWSLHVVPLDEDLFSLELSPGVKEDNLLKHSVSALVNFESQNGRFPRASGRGPN
SAKLVEIWDKWYQEEAINNARKDEYEVSTSYDSVLIMDRTMDWVTPFLTQLTYLGLLDEI
LGIEQMNVKLPPNLVNRNENLSSGSHKKFSLSSSYSTISKDVKDANFNCIGSYLGKIARK
LSSDYDGRRQAKTVNQIRDFVSKLGSLQSEHTSLNIHTGLAELMMQHAKSSTFQKILQIQ
QSLVSGADPSSQFPLLDQLIYTDVPVEEVFRILCLASIVSTGLKQKDIDFYRKEIVQTYG
YKNLLTFQCLIDAGLLRVRPSSNISLQRSFSYTTWLNNYPLINEEVNEQHPSDISYTYSG
YGPLSVHMSYDILQNRDNPEKLARLNSFPGEYVDKWFKQQDRNFSRTFTRGTDKKRKILI
FFLGGCTFTELSAFRLLADKLGKFEFTFMTTGMITGGKIVQSFMPSIQTLIDE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacgttaaagaatccgccaggttttatttattagatcttatagactctatt
gcgggaaagaaaagcctgttactagagcgagagctatctggtattctagggcaaattatt
acgactaatacccttcaagagcatggaattcctcaagttttttggttcgatagtaatatt
cctcaagaattagaccaaaaaatcatatatttatgtcgacccacttatgcgaatgctaaa
ttagtttctgctcatgttcgacagcatcagcagaatatgaaccagactgaaaacaccgta
attttactaccttgtacaaatgttttatttgagacggtgctgcaagaagagggtgttttc
ggcgaactggtgattatggaatggtcgctgcatgtggtaccgttggatgaggaccttttt
tctttagaattaagtcctggtgttaaagaggataatttacttaagcattctgttagtgct
ctggtcaactttgaatcccaaaacggtcggtttccacgggcatctggtcgtggtcccaat
tctgctaaacttgttgagatttgggataaatggtaccaagaagaagctatcaataacgcg
agaaaagatgagtatgaagtttctacttcttatgacagtgtcttgattatggatcgcaca
atggactgggtgactccatttctcactcagttaacgtatcttggtcttttagatgaaata
ctaggaattgaacagatgaatgttaaactgcctccgaacttggtaaaccgaaatgagaat
ttgtcttccggatcgcacaaaaagttttccctaagttcgtcatacagtaccattagtaag
gatgttaaagacgcgaatttcaattgcattggctcctatttgggaaaaattgctcggaaa
ctttcgagcgactatgatggtcgccgtcaagctaaaacggtgaatcaaatacgcgatttc
gtttcgaaattgggttctttacagtcggaacacacttcattaaatatacacactggactt
gctgaactaatgatgcaacatgctaaaagtagtacctttcaaaagattttgcaaatacag
caatcacttgtgtctggtgctgacccttctagtcagtttcctttgctggatcaactgata
tatacggatgtacctgttgaagaagtgttccgtatactctgtttagccagcatcgtctca
acagggttaaagcagaaagacatcgatttttatcgaaaagagattgtacagacttatggc
tataaaaatttattgacctttcaatgtttgattgacgctggattgttacgagttcggcct
tcaagtaatatctctttacagaggtcattctcatatactacttggctcaacaactatcca
ttgattaatgaggaagtcaatgaacagcatccttcagacatttcttatacctacagtgga
tacgggcccttgtctgtgcatatgtcttatgatattctgcaaaacagagacaatcctgag
aagcttgcacggctaaacagtttccctggggaatacgtagacaaatggttcaagcagcaa
gatagaaacttttcccgaacgtttactagaggaacagataaaaagaggaaaatccttatt
ttcttcttagggggctgtacatttactgagctttcagcgtttcgtttgttggctgataaa
cttggcaaattcgaatttacatttatgactacaggtatgatcactggtggtaaaatagta
cagtcctttatgccgtctatccaaactttgattgatgagtaa
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