Schizosaccharomyces osmophilus (fission yeast): SOMG_01140
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Entry
SOMG_01140 CDS
T09274
Symbol
top1
Name
(RefSeq) DNA topoisomerase I
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
som03032
]
SOMG_01140 (top1)
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SOMG_01140 (top1)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Topoisomerases
SOMG_01140 (top1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
80874622
NCBI-ProteinID:
XP_056036654
UniProt:
A0AAE9WBI4
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All DBs
Position
1:join(2469370..2469382,2469433..2469533,2469581..2471896)
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AA seq
809 aa
AA seq
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MSSSDSDSISISARRRSGRNTGRQINLKESDDENESFDELPLSEAKSVKTESDDDEDDVP
IGSKRAPVEKKNKRPTKRTKNNNETKKGTRKKAEPVKEEDEDDLPLNTKAKPRTARGKSK
ESKKVNGTPVKKEEMDDRDLTPLKSGPPSPSPKSSTITSRNRSPNDDDEEEEEEDFKWWE
QGNIDGTQKWSTLEHSGVLFAPQYEPLPKDVKLYYDGKPVDLPLEAEEVAGFFGAMVETD
HAKNPTFQKNFFRDFLAVCKECNFKHNIKEFSKCDFSQMFHYFERKRDEKRNMSKEQKKE
IKKKKDEEEESYKWCTLDGRKERVGNFRIEPPGLFRGRGNHPKTGSLKRRVFPEQITINI
GKEAPVPKPLPGHHWAEVRHDNTVTWLATWHENVNNNVKYVFLAAGSSLKGQSDLKKYEK
SRKLKDYIDDIREGYTKDLKSDLTVERQRGTAMYLIDVFALRAGNEKGEDEADTVGCCSL
RYEHVSLKPPNIVIFDFLGKDSIRYYNEVEVDPQVFKNLRIFKRSPKKEGDLIFDRLTTN
TLNKYLTSLMDGLSAKVFRTYNASHTMNEELKKMPKSLSLADKVLFYNRANRTVAILCNH
QRSVTKNHDVQMERYEERIKALQYQRLRLHRMMLSLEPKLSKKMPELVQGEAGIDDEWVK
RHHELLYELEKEKIKKKFERDNEKIMAEDPKGKLPDNELEKRLTAADQLKAVLDAEYRTT
KVHPGRATLERLESRLSKLNDRIKVMRTQMIDKDENKTTALTTSKINYIDPRLTFSFSRR
EEVPIEKLFSKTIRDKFNWASETPADWEW
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcagattcggattctatttctatttcagctcggaggcgatctggtcgaaat
actggccgacaaataaatcttaaagagtcagacgatgaaaacgaaagttttgatgaactt
cctttgagtgaagctaaatctgtgaaaactgaaagtgatgacgatgaggacgatgttcct
ataggaagtaaacgcgctcctgtagagaaaaaaaacaaacgccctacgaaacgtaccaaa
aataacaatgaaacaaaaaaagggactcgcaaaaaagctgaaccggttaaggaggaggat
gaggatgacctaccattgaataccaaagccaagccaagaacagccagaggaaaatctaag
gaatcaaagaaagtcaatggtacccctgtaaagaaagaagaaatggatgatcgagactta
actccgttaaaaagtggtcctccatctccatcgcctaaatccagtacgattacttctcgt
aatcgttctcccaatgatgatgatgaagaagaagaagaagaagactttaaatggtgggag
caaggaaatattgatggtacccaaaaatggtcaaccctagagcacagtggtgtcttattc
gctcctcaatatgaacctctgcccaaagacgttaaactttactatgatggaaagccggtt
gatcttcctttggaagcagaggaagttgcaggattttttggtgcaatggtagaaacagat
catgcaaaaaatccaaccttccaaaaaaacttttttcgcgattttctagcagtctgcaag
gaatgtaattttaaacataatattaaggaattttcaaagtgtgatttttcccagatgttc
cactattttgagcgaaaaagagacgaaaaacgaaatatgtcaaaggagcaaaagaaggaa
atcaagaagaagaaagatgaggaagaagaaagctataagtggtgtacactggacggtcgt
aaggagcgtgttggtaatttccgcattgagcctcctggacttttccgtggccgaggcaat
catcctaaaacgggctcactaaagcgacgtgtttttccagagcaaattacgatcaatatt
ggaaaagaagcacctgttccgaagcctttaccggggcatcactgggctgaagtaagacat
gataatacagttacttggctagctacttggcatgaaaatgttaataataatgtaaaatac
gtattcttggcggctggtagctctttaaagggacaaagtgatttgaagaaatacgagaaa
tctcggaaactaaaagattatattgatgatatccgtgagggttacactaaagacctcaaa
agtgatttgacagtggagcgccagcgaggaacggccatgtatttgattgatgtttttgcc
cttcgtgccggtaacgaaaaaggtgaagatgaagcagatactgtcggttgttgttcattg
cgttatgagcatgttagtcttaaacccccgaacattgtcatttttgactttttaggtaaa
gattcaatccggtattataacgaagttgaggtagaccctcaagtgtttaagaatttgaga
atctttaaacgttctccaaagaaagaaggagatttgatattcgatcgtctgaccaccaac
accttgaacaagtaccttactagtctaatggatggactgtcggccaaggtattccgtaca
tataacgcatctcatacgatgaacgaagaactaaagaaaatgccaaagagcttatccctt
gcggataaggtcttgttctataaccgtgccaacagaacggtagcaattttatgtaaccat
cagcggtctgttacaaagaatcacgacgttcaaatggaacggtacgaggaacgtattaaa
gctttacaatatcaaagacttcgtttacatagaatgatgttaagtttagaacctaaacta
tccaaaaaaatgccggaactggtgcagggagaagcaggtatagatgatgaatgggttaaa
aggcatcacgagttactttatgaattagaaaaggaaaagatcaagaaaaaatttgaacgt
gacaacgaaaaaatcatggccgaagatccgaaaggcaagcttcctgacaatgagttagaa
aagcgattaacggcagctgatcagttaaaagcggtattggatgctgagtatagaacaacg
aaagtgcatcctggacgagcaacgctggaacgattggaaagccgtttgtcaaaattgaac
gaccgaatcaaggtgatgcgtactcaaatgatcgacaaagatgaaaacaagacgacggct
ttaacaactagtaaaatcaactacattgatccacggcttacgttttcatttagcaggcga
gaagaagttcctatagagaaattgttcagtaaaacgatccgcgacaagtttaattgggcc
tctgaaacacccgcagattgggaatggtga
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