Schizosaccharomyces osmophilus (fission yeast): SOMG_01186
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Entry
SOMG_01186 CDS
T09274
Symbol
prp17
Name
(RefSeq) Prp19 complex WD repeat protein Prp17
KO
K12816
pre-mRNA-processing factor 17
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_01186 (prp17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_01186 (prp17)
Spliceosome [BR:
som03041
]
Complex C
Other components
Step II factors
SOMG_01186 (prp17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
Cas_Csy4
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
80874668
NCBI-ProteinID:
XP_056037042
UniProt:
A0AAF0AWC8
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All DBs
Position
1:complement(join(2578289..2578425,2578473..2578520,2578563..2579178,2579226..2579978,2580019..2580129))
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AA seq
554 aa
AA seq
DB search
MLIPEYSSDSEDQDASLNTSGPVSSFAINAAPTVIETSNNRDLISRSESNFKELSHNVPI
DKMHKPLYGPANPYLTRNQESQKNTITGYVERENVSNAVFNQEFNSYGKRKTQFGESEGE
PADPSTLRELRKEIKKSRKAAGDPSILEGENTYRGPWAKYDDKSQLSPSSEELEDVEEIV
EYTNEDQEKADKEDATVSATPIYEEKPEVKEYSTFHKDSLYDYQNRTYLHVPTDAGLSLT
GTPGEQVCYLPKKHIHTWKGHTKGISCLRFLPTSGHLLLSGSLDSEVKIWDVYHDRSLLR
TFHGHSKPIRDLSFNQSGSSFLSASFDKTIKLWDTETGKCQQRFATGKQAHCVRFQVDPE
RPYEFLAGMSDKKILQFDTRAPDSVQSYSHHLGAVNSITYLENGKRFVTTSDDSSMRFWE
YGTPIPIKYVADIGMHSMPRVALRPNGKALACQSLDNCIYVYSAVEKYRQNKKKSFRGFN
CSGYSLEVGFSPDGRFVYSGDSSGNACFWDWKTCKLLSKLPAHNGPLQSMAFHPQETSKV
ATSSILDGVIKYWD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctaataccagagtattcaagtgattcagaagatcaagatgctagtctaaatacatca
gggcccgtttcttcttttgcaatcaatgcagccccaacagtcattgaaacttcaaataac
agagatcttataagccgttcggaaagcaattttaaagaactgtctcacaatgttccaatt
gacaagatgcacaagccattgtatggcccggccaacccatacctgacgagaaatcaagaa
tcccaaaaaaatactataacaggctatgttgagcgcgagaatgtttcaaatgctgttttc
aaccaagagtttaactcttatgggaaacgaaaaacacaatttggggagtctgaaggtgaa
ccggccgacccaagcacgcttagagagcttagaaaagagataaaaaagtcaagaaaggct
gctggcgatccttctattcttgaaggtgagaatacatacagaggcccttgggccaagtat
gatgacaaaagccagttatcaccgtcatcagaagaactcgaggatgtagaagaaattgta
gaatatacgaatgaagatcaagaaaaagcagacaaagaagatgcaacagtatccgctacg
ccaatttatgaagaaaaacctgaagtgaaggaatactcaacttttcacaaagattctctt
tatgactatcaaaaccgaacttatcttcatgttccaacagatgctggcttgagtctcact
ggcactcctggcgaacaggtttgctatctccctaaaaagcatatacatacctggaaggga
catacaaagggaatttcctgcttacgctttctccccacaagtggccatttattactttca
ggatccctagattctgaagtcaaaatttgggatgtttatcatgatcggtcactactgaga
acatttcatggccactcaaagcctattcgagacctttcatttaatcaaagcggtagttct
ttcttgagtgcttcctttgataaaactatcaagctatgggataccgaaactggtaagtgc
cagcagcgttttgctactggtaaacaagctcattgcgttcgctttcaagtggacccagaa
agaccatacgaatttttagccggtatgtctgacaagaaaatattacaattcgatactcga
gccccagatagtgtacaatcgtattcgcaccacctaggtgccgtaaattcaataacttat
ttggaaaatggtaaaagattcgttacaacttccgatgattcctccatgcgcttctgggaa
tatggaaccccaataccaatcaaatacgtggcagatataggaatgcattctatgcccagg
gtcgctcttcgccccaatgggaaagcattggcatgtcaatctttggataattgcatctac
gtctattctgctgtcgaaaagtatcgacagaacaaaaagaaatcgtttcggggtttcaat
tgttctggttacagtttagaagttggattttctccggatggccgttttgtgtacagtggt
gattcctctggaaatgcttgcttttgggattggaaaacatgtaagttgttatctaagctt
ccagctcataacggtcctctacaaagtatggctttccatcctcaagaaactagcaaggta
gcgacctcatctattttggacggcgtaattaaatattgggattaa
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