Schizosaccharomyces osmophilus (fission yeast): SOMG_01246
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Entry
SOMG_01246 CDS
T09274
Symbol
sec31
Name
(RefSeq) COPII-coated vesicle component Sec31
KO
K14005
protein transport protein SEC31
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SOMG_01246 (sec31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_01246 (sec31)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
som02044
]
SOMG_01246 (sec31)
Membrane trafficking [BR:
som04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SOMG_01246 (sec31)
Secretion system [BR:
som02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
SOMG_01246 (sec31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40
Beta-prop_EML
WDR55
SRA1
Beta-prop_IFT140_1st
TPR_Sec16
EIF3I
Beta-prop_HPS5
TPR_19
Prp18
Motif
Other DBs
NCBI-GeneID:
80874728
NCBI-ProteinID:
XP_056034990
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Position
1:2722957..2726610
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AA seq
1217 aa
AA seq
DB search
MRLKDINKSATLAWSPQGVNNNQPLLAVGGYIGTESTRESDNLLEIWDTSAESNQPIGST
NTNTKFYDLDWERSLDKQHGVIAGTIEEGGVGFYDASAILSSDESSASIATYKTENHSIL
GPLDFNPVQTNLLASGDNNGDVWVWDLKNPLKPFSLPKQNRSSEVHVVAWNSKVSHILAS
GNSSEYTTVWDLKAKRQILNLSYMGATGTNATGGVNSIAWHPENATRLVTAIDDNRNPII
LTWDLRYPTAPQNVLTGHQKAALSLSWCPHDPRFLLSSGKDGRAIVWDVDTGESLGNFPR
SGNWYTKGTWCPSNSNRVATSSLDGKVSIFSIQSTNTDKTHEASLQGVTSIDDNEFFNNL
PSIAGSQEPAFTLPIAPKWYKVPCGVRFGFPNKVIRFSPDSKNVTIEPLEVEENEESIDK
FSSTAKFQTEDDIVSFCESGAKSAKTDEEANNWKLLKAVSQRVSRSEFVKLLGRENIKEM
HKEDSTTELDKNTKASINLNDTSKNQNNEIYDDDTSFYGKLSDNLQNTTISDKEVEFSND
PFKIFNSEDSELETNITKMLLTGDILSAIKTCIDDKKISEALFLATFGDEECRKCVRAAF
YEMQEHKPSYMRLSACIAGNDLENAVQNADLSQWKDIFVFICTYATNEAFSPLCGILGKR
LEDLDDFSSNRAAEFCYIASKSLQSYANLWLKELANGGVSEDSKSSYVGYVDQLTKLMDK
VNAFRSIVAYEDDELSATGDWKLSGLYEVYLEYSRILLSANHYEQARSYLNLVPASFPGA
KQEVERLSILLTPAPIPEINRSTYGPSRSVPHPASSIIPQPIQLATNSSNPYASAYSSNI
SQAAAGPPMTSTIPPPAVSNNVAAGWNDAPIVNQPPLRRAAPSLPAVRSPFPNAGAPLPP
NMSRTSSTSTLPPPPSVGAAAAAPPPPKIGETYQPPAQTVSQPPVNQSQKPANPYTPIGV
QSPTRTLSGLSSPAETKGTSPYVPLGGTARPPLISPPVPQTAPFSTAVPPPKASANRVVP
VPPTPSQRISSYEPVNTGFTQSPPTAMPPVSAQVPPPVSGSAGGTVPPPPISSRSIISPP
PQNLSSKRQSISGPSVATAGMTTYPQGDRSHIPPNLKPIYEMLNAEFLRVSQSVPPQMSR
VLHDMEKRLNMLYDRLNANALSKSLTDELYALAVALTNRDYQTASNIQVTLVTTLQDQCE
HWIVGITRLITISKSTA
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaagatatcaataagagcgcaacattagcgtggtccccacagggagtaaat
aataatcagcctttacttgccgtaggtggttatataggcactgaaagtaccagagaaagt
gacaatcttttggagatttgggatacttcagctgaatccaaccaaccaattggctctacg
aacactaataccaaattttatgatcttgactgggaaagatctttagataaacaacacggt
gtcattgctggtactatagaggaaggtggtgttggattttacgacgcctcggccattttg
agttctgatgaaagcagcgcttccatagcaacctataaaactgaaaaccattccattcta
ggacctttagatttcaatccagtacaaaccaatcttttagcatctggtgataacaatggt
gatgtttgggtttgggacttaaaaaaccctttgaagcccttttccttacctaagcagaac
cgttcttctgaagtccatgtagttgcctggaatagcaaggtgtcccatattcttgcttcg
ggtaattcgtcagaatataccaccgtatgggatcttaaagcaaaacgacaaattttgaat
ctctcatatatgggtgctactggtacgaatgctactggcggagttaatagcattgcctgg
catcctgaaaatgctactcgtcttgtcactgctattgatgataaccgaaatcctatcata
ttgacttgggatttacgttatcctacagcacctcagaacgttcttacgggccatcaaaaa
gctgccctttcattatcttggtgccctcatgatccaagatttttactcagtagtggtaaa
gatggtcgtgctatcgtttgggatgttgataccggtgaatctttaggaaacttccctcgt
tccggaaactggtatactaaaggcacttggtgtccttctaattctaaccgggtagcaact
tcctccttagatgggaaggtctctattttctctattcaaagcacaaatactgacaaaact
catgaggcttctttgcaaggtgttacttctatcgatgacaacgagtttttcaataatctt
ccttcaatcgctggctctcaggaacctgcctttactttgcctatcgctcccaagtggtat
aaagttccctgtggcgttcgctttggatttcccaataaagtcattcgttttagtcctgat
tcaaaaaacgttaccatagagcctcttgaagttgaagaaaatgaagagtctatagataaa
ttttcttccacagctaagtttcaaacggaggatgacatagtctctttttgtgaatctggt
gcaaaatctgcaaaaacagacgaagaagccaataattggaagcttcttaaagctgttagt
cagcgtgtatctagaagtgaatttgttaagcttttaggtcgtgagaatattaaggaaatg
cataaagaagacagcaccaccgaattagacaagaatacgaaagcttctatcaatcttaat
gacacatctaagaaccaaaataatgagatttatgatgatgatacctcgttttatggtaaa
ttatcagacaatttacagaatactacaatctctgataaggaggttgaattttcgaatgac
cccttcaaaatattcaactcggaggactctgagcttgaaacaaatatcacaaaaatgctg
cttacaggtgatatattatctgctattaagacctgtattgatgacaagaaaatatctgaa
gctctcttcctagctacttttggcgatgaagaatgccgcaagtgtgttagagcagcattt
tacgagatgcaggaacataaaccatcatatatgcgtctttcagcttgtattgctggtaat
gatttagaaaatgctgtgcaaaatgcagatcttagtcagtggaaggatatttttgttttc
atctgcacatatgccactaatgaagcattttctcctttatgtggtatacttggcaaacgt
ttggaagaccttgatgacttcagctctaaccgtgctgcagaattttgctatattgctagt
aaatcattacaaagttatgcaaatctatggcttaaggaacttgccaatggtggcgttagt
gaggattctaagtcttcttatgttggatatgttgatcaactcaccaaacttatggataaa
gttaacgcatttcgctcaatcgttgcatatgaagacgatgaattgtctgcgactggagac
tggaagttaagtggtctttacgaagtttaccttgaatattctaggattttgctttcggct
aatcattatgaacaagctagaagttatttgaatctcgttcctgcttcatttcctggcgca
aaacaagaagttgaaaggttatcaattcttcttacacctgccccaattcctgaaattaat
aggtctacttatggtccttctcgaagtgtgccgcatcctgcttcttcaattattcctcag
ccaattcaattggcaactaattccagtaacccttacgcttctgcatactcgagcaacatt
tcacaggctgctgctgggcctcccatgacctctactattccgccacctgcggtatcgaac
aatgttgcagcgggctggaatgatgctccaattgttaatcagccaccattgagacgtgca
gctccctcattgcctgccgtaagatcgccgttccctaacgctggagcacctttgcctcct
aatatgtcacgcactagtagtactagtacgctaccaccaccaccttctgtaggcgcggcc
gcagccgctccccctccaccaaagattggtgaaacgtaccaaccgccagcacaaaccgta
agccagcctccggtgaatcaaagccaaaaaccggctaatccttacacaccaataggggtt
cagtctcccacaaggaccttatcaggtctttcttctcccgcagagacaaaaggtaccagt
ccttatgtgcctttgggtggtactgctcgacctcctttaatttctcctcccgtcccacaa
acggctccgtttagtaccgctgtacctcctccgaaagcttcggcaaatcgagttgtccct
gttccccctacacctagccagcgtatctcctcgtatgaaccggtaaataccggtttcacc
cagtcaccacctacggcgatgcctccagtaagtgcccaggtacctcctccagtgtctggt
tccgcgggtggtactgtacctccacctcccatctcctcgagatcgattatctctcctccg
ccgcaaaatctttcttcaaagagacaatcgatctctgggccttcagttgctactgctgga
atgactacataccctcagggagatcgctctcatattccacctaatttaaaaccaatttat
gagatgcttaatgccgaattcttgcgtgtttcccagagtgttcctccacaaatgtcgcgt
gtgttacacgatatggagaagcgactcaacatgttgtatgaccgacttaacgcaaatgct
ctttctaaatcattgactgatgaactctacgcgcttgctgtcgcattgacgaaccgtgat
tatcaaactgcatctaatattcaagtcactctggtcaccacccttcaagaccaatgtgaa
cactggattgtcggaattaccagacttattacgataagtaagtctacagcctaa
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