Schizosaccharomyces osmophilus (fission yeast): SOMG_01253
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Entry
SOMG_01253 CDS
T09274
Symbol
shq1
Name
(RefSeq) box H/ACA snoRNP assembly protein Shq1
KO
K14764
protein SHQ1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_01253 (shq1)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
SOMG_01253 (shq1)
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
DUF5312
KleE
Motif
Other DBs
NCBI-GeneID:
80874735
NCBI-ProteinID:
XP_056035185
UniProt:
A0AAE9W6J3
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Position
1:complement(join(2737995..2738127,2738180..2738907,2738966..2739296,2739342..2739409,2739452..2739526))
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AA seq
444 aa
AA seq
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MITPKFELRQDADFVYLSIQAPHIKAQNAEIEAMGSEIHFCIAPYFLKLELPGNVLDDER
ANASYDIGKGMIHIKFPKENSGEEFPNLDLLTTLLANKEKPEAPKKALIEEVSDIPAATS
TEGDVQANDVDPEIDWRTVRFDDPDFDWGLLQRMEDKKMEYTSTVNYGFNDQYTGLLKYL
EGNEINVLPEPEITDPIQRSEIRKKTEDEKFDPEYYLADFHDHEMIDELIGYTPSYVELS
NRAKAGDPISFEFTENEKQALLSLPRKSYIIENPKRIYLNLVALIFAYAYDHRTTLGDPS
SESSWNIGIMAPNVACLDTNFSTIHEVACACFRRALAYPLYRNWNLAEACWKDTYAIVSL
GKRWILRVLLCIKALFEHHDVYYIYNTMIINDYAYWIQTANDNVLEALTYQVMEYMPKKS
DIGWQLEDLETESIQQMETYDGED
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgattactccaaaatttgaattgcggcaggatgctgattttgtttatttaagtattcaa
gctccccatataaaggctcaaaatgctgaaattgaagctatgggatcagagatccacttt
tgcattgctccatactttctgaaactagagcttccagggaatgtattagacgatgaacga
gccaatgcttcctatgacattggaaaaggaatgatacatataaaatttccaaaggagaat
tctggagaagaatttcctaatttagatttattaacaactttgcttgcgaacaaagaaaag
ccagaggcacctaaaaaagcattgattgaagaagtaagcgatatcccagctgcgacaagt
accgaaggagatgtacaagcaaacgatgttgatccagaaattgactggagaactgttcgc
tttgatgatcccgactttgactggggtttgcttcaaagaatggaagataaaaagatggaa
tatacatctacagtaaattatggattcaacgatcaatacaccgggttgcttaagtacttg
gagggaaatgaaataaatgtgttgccagagccagaaattacggacccgatacagaggagc
gaaattcgaaaaaaaacggaagatgaaaagtttgatccagagtactatttagctgatttt
catgatcatgagatgattgatgagttgattgggtacactcctagttatgtcgaattgtcc
aaccgtgctaaagccggagacccaatttcttttgaattcacggaaaatgaaaaacaagct
ttactatcccttccgagaaaatcgtacataatcgaaaacccaaaacggatttaccttaac
ctggtggcactgattttcgcatatgcttatgatcatcggacaactttaggtgatcctagt
agtgaatctagctggaatatcggaataatggctcctaatgttgcatgtcttgacacaaat
ttttctaccatccacgaagtagcctgtgcgtgtttccgtcgagccttggcatatcctttg
tatcgaaattggaatttagcagaagcctgctggaaggacacttatgccattgtcagttta
ggaaagcgatggattttgcgcgttttactttgtataaaagctttatttgaacatcatgat
gtatactacatctacaataccatgattattaatgactatgcttattggatacaaacagca
aatgacaacgtgctagaagctctcacttatcaggttatggaatatatgccaaaaaagtct
gatattggatggcaattagaggacttggaaacagagagtatacaacaaatggaaacatat
gatggagaggattag
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