Schizosaccharomyces osmophilus (fission yeast): SOMG_01280
Help
Entry
SOMG_01280 CDS
T09274
Symbol
tfb4
Name
(RefSeq) transcription factor TFIIH complex subunit Tfb4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03022
Basal transcription factors
som03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SOMG_01280 (tfb4)
09124 Replication and repair
03420 Nucleotide excision repair
SOMG_01280 (tfb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01280 (tfb4)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_01280 (tfb4)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SOMG_01280 (tfb4)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SOMG_01280 (tfb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
zf-C2H2_14
YuzC
Motif
Other DBs
NCBI-GeneID:
80874762
NCBI-ProteinID:
XP_056036800
UniProt:
A0AAF0AVJ2
LinkDB
All DBs
Position
1:join(2793370..2794183,2794230..2794312)
Genome browser
AA seq
298 aa
AA seq
DB search
MEDFSTLKQPTGTWEASEEASDTPSLLVVILDANPASWYSLSKRISAAKVLADINVFLNA
HLAFHHDNRVAVLASHYDKVEYLYPKPETEETVPLLDPAKEANTYRKFREVDDFVLNGMR
RLMKSTSKVSKKTLMSGALSRALAYVNQVQNQKYIRSRIVIFSLTGDVALQYIPTMNCIF
CAQKKNIPISICNIAGGTLFLEQAADATGGIYLKVDNPNGLLQHLMMTLFPDQNLRKHLN
TPNQANVDFRATCFCHKNVLDVGFVCSVCLSIYCEPREFCSTCQTKFTPTTLSKRKFS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttttctacattaaagcaacctacagggacctgggaagcttctgaagaagca
tcagatactccaagtttacttgtggttatattggatgcgaatccagcttcttggtattca
ctttctaaacgtatatccgctgcaaaagtactggcggatatcaacgtctttttaaatgca
catttagcatttcatcatgacaatcgagttgctgttttggcttctcattatgacaaggtt
gaatatctttacccaaagccagagactgaagagactgttcctttgttagatcctgcgaaa
gaagcaaatacatatcgcaagtttcgagaggttgatgattttgtcctcaatgggatgagg
cggttgatgaagtccacatcaaaggtatccaaaaagacgctgatgtcaggagcgctatcc
cgtgccctggcatatgtaaaccaagtgcaaaatcaaaaatatatccgatctaggatagtt
attttctcactgactggtgatgtggctcttcaatatattccgacgatgaattgcattttc
tgtgcacaaaagaaaaatattccaattagcatatgtaacattgcgggtggaacactcttt
cttgagcaagctgcggatgctacaggaggcatttacttaaaagtcgataaccccaatggt
ttattgcagcatttaatgatgactttgtttcctgaccagaatctccggaaacatctaaat
accccaaatcaagcgaatgtcgattttcgggctacttgtttctgtcataaaaatgtttta
gatgtcggctttgtctgctctgtatgcttgtctatctactgtgaaccaagagagttttgc
tcgacctgtcaaactaaatttactcccactacactatccaaacggaagttttcgtaa
DBGET
integrated database retrieval system
