Schizosaccharomyces osmophilus (fission yeast): SOMG_01332
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Entry
SOMG_01332 CDS
T09274
Name
(RefSeq) KH domain RNA-binding protein
KO
K13210
far upstream element-binding protein
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_01332
03041 Spliceosome [BR:
som03041
]
SOMG_01332
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
SOMG_01332
Spliceosome [BR:
som03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SOMG_01332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
80874814
NCBI-ProteinID:
XP_056035043
UniProt:
A0AAE9W638
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All DBs
Position
1:2899669..2900889
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AA seq
406 aa
AA seq
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MSKSDAVSRLLAEISAQQSQKQVVPELPYPTSSGIINLNDPNPSLGTFVRLYDPAFSSQV
YQDPSPGTAPVNPSTYHPPNPSSSLKTSYSFPVKSCYVGMLIGKRGEKLQKMESATKTRV
QFMPETPSKPGERTAIITGQTENIDMCRREISQKIKDYQDVLTSTAFPALAYATGSNPNP
TYETPDPFVIPEHHIGLVIGKGGEKIRDLQEATETKIIINTDTDLMNPLRPVSFQGSPDR
VSRAKSIIQDIVVQEQLKINSLSTTFNPNKVHTDVMAVPRESVGMIIGRGGETVREIYAK
TMCQLKISPDGGPSVPEREITFIGTPSSVELAKWDVLDRLERAGVPLRRLAHPPIHPAAS
LPQTMPPTNVSAMPMPMPEPYPAPYGDYENYMKSWQQYPSNPMYPK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatctgacgcagtttctcgcttgttggcagagatttctgcccagcaaagccaa
aaacaagttgttccagagcttccttatcccacttctagtggcatcatcaacttgaacgac
cctaatccatctttgggaacattcgttcgtctttatgatcctgctttctcttcccaagta
taccaagatccatcgccaggaactgctcctgtaaacccatctacatatcatccaccaaac
ccttctagctccttgaaaacttcgtattcgttccccgtcaaaagctgctacgtaggcatg
ctcattggaaaacgcggcgaaaagctccaaaaaatggaatcggccacaaagacaagagtc
caatttatgcctgaaactccttcgaaaccaggcgaacgaacggctatcattaccggccaa
accgaaaacattgatatgtgtcgccgagaaatttcgcaaaaaataaaggattaccaagat
gtacttacatctacggcatttccggctttagcatatgccactggcagcaatcccaatccc
acgtatgagacccctgatccatttgttattcctgagcatcacattgggcttgttattggg
aaaggcggtgaaaagatccgcgatttgcaagaagcaacagaaacaaagattataattaat
actgataccgatttaatgaaccctttgcgaccggtttccttccaagggtcaccagatcgt
gtttctagagcaaagtctatcattcaagatattgtggtacaggaacaactgaaaatcaac
tctctttcaactaccttcaatccaaacaaagtacacacggatgtaatggctgtaccaaga
gaatctgtgggaatgattattgggagaggcggtgagaccgttcgtgagatctatgcaaag
accatgtgccagttaaaaatatctcctgatggtggtccttctgttcctgaacgtgaaatc
acatttatcggaactccgtcaagtgtggaattggcaaaatgggacgttttagaccgattg
gagagagccggcgtgccccttcgtcgccttgctcatccacccattcatcctgccgcgtct
ttacctcaaacgatgcctccgacaaacgtttctgcaatgcccatgcctatgccggagcca
taccctgctccgtacggagattatgaaaattacatgaaatcatggcagcagtatccttct
aatcccatgtaccccaagtaa
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