Schizosaccharomyces osmophilus (fission yeast): SOMG_01365
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Entry
SOMG_01365 CDS
T09274
Symbol
cft2
Name
(RefSeq) mRNA cleavage and polyadenylation specificity factor complex
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SOMG_01365 (cft2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_01365 (cft2)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SOMG_01365 (cft2)
U7-dependent histone pre-mRNA processing factors
SOMG_01365 (cft2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_3
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
80874847
NCBI-ProteinID:
XP_056035920
UniProt:
A0AAE9W8C7
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Position
1:join(2961565..2961937,2961996..2963998)
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AA seq
791 aa
AA seq
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MLNYQCLETKSLCGTSHIELDGIHIYIDPGSDDSLEHPPVSEQPDLILLSHSDLSHLGGL
VYAYHKYDWKNAHIYATLPVINMGRMTMLDAIKSNLVGDITKEQVNQVFDSIIALRYSQP
TSLLGKCNGLTITAYNAGHSLGGTLWSLLKESESILYAVDWNHSKDKHLNGAALYSNGHI
LEALNRPNTLITDANNALVSTPSRKKRDEALIESVMSSLYKGGTVLLPVDSSSRVLELCC
FLDSHWSSTQPPLPFPIFFLSPTSTKTIDYARSMIEWMGDNIVRDFGIDESLLEFRNIHT
ITDYSQLSSIAPGPKVILSTSLTLECGFSQQILLNFMSQNSNDLILFTQKSRCQSSLAKQ
FIRYWEQACKKLMDIPPPVGLYAEHNIKVKRMEALAGEELKQYQEQQLQKISRTAEDSAL
ELRNKTILDEDLSSSSDEEDDEMGLTPEAPGAALGSALFLSGKSFDLNLRDQSVQNLQTK
YKMFPYVEKRRRIDEFGEVVKQEDFVIINEPMNNFEAEASPSDSTAIDPTGKRKWSEIND
GIHGQNEDELQEEIPSKIVAEDLMIRISCQVQFIDIEGLHDGRSLKTIIPQVNPRKLVLI
HATDEEREDMKRTCSALSAFTKDVYLPKYGEDINVSIDVNAFSLKLSDDLIRNLIWTKVG
NCEVSHMLAKIEKPSESEIQDSEANEEDAKRNDAEKEADHLPVLNPVTLRSDLARAPRAA
PLLVGNTKLAELRKALLDQGISAELKGEGVLLCGGVVAVRKLSGGKISIEGGLSNQFFEV
RKMVYKMLAIV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgctcaactaccaatgcttagaaacaaaatctctctgtggaacatctcatattgaattg
gatggaattcacatttatattgacccaggaagtgatgatagtttggagcaccctcctgta
tctgaacagccggatttgattttgttgtctcattcagatttatctcatttaggaggatta
gtatacgcatatcataaatatgactggaaaaatgctcatatatatgcaactttgcctgtt
ataaatatgggtcgaatgaccatgttggatgctatcaaaagtaatctcgtcggcgatatt
acaaaagaacaagtcaatcaagtttttgacagtattattgctttgcgttattcacagcca
acttctttgttaggaaaatgtaatggcctaacaatcactgcttataacgcagggcattct
ttgggtggtactttatggagccttttaaaagagtcggagagtattctctatgctgttgat
tggaatcattcaaaggataagcatctaaacggtgctgctttatactcgaatgggcacatt
ttggaagctttaaatcgtcccaacacgttgatcacagatgcaaataatgctttggtttcc
accccttcgcgcaaaaagcgggatgaagcattaatcgaatctgtgatgtcttccctttat
aaaggcggtacagttctactccccgtagattcttcttctcgagttttggaattatgttgc
tttttggatagccattggtcttcaacacagcctcctttaccctttcccatcttctttttg
tctcctacctctactaaaactatagattatgcaaggagtatgattgaatggatgggagat
aacattgttcgtgattttggtatagatgagagccttctggaatttcgcaacatacataca
attacggattattctcaactatccagcattgcacctggtcccaaagtgatcctttctact
tccttaacattggaatgtggattttctcagcaaatcttacttaattttatgtctcaaaac
tcgaacgatttaattttgtttacccaaaagtcaagatgccaatcttctctagctaaacaa
tttatacgctattgggaacaggcatgcaaaaaattaatggatattcctcccccagtcgga
ttatacgcagaacataatatcaaggtaaaacgcatggaagctttagcgggcgaggagctg
aagcaataccaagaacaacagctacagaaaataagtcggaccgctgaagatagtgctttg
gaactccgaaataaaacaatattggatgaagatttgtcttcctcttctgatgaagaagac
gatgaaatgggattgactcctgaagctcctggggctgcccttggatcagctttattctta
tctgggaagtcttttgatttaaaccttcgtgaccagtctgtacagaatttgcaaactaag
tataaaatgttcccttatgttgagaaaagacgaaggattgatgaatttggcgaagtggtt
aagcaagaagattttgtgatcatcaacgaaccgatgaataacttcgaagcagaagcttca
ccatctgatagtaccgctatagatcctacaggaaaaaggaaatggtcagaaataaatgat
ggaattcatggacaaaatgaggacgaattacaagaagaaattccctcaaagattgtggcc
gaagatttaatgataaggatatcatgtcaagtacaattcattgatattgaaggattgcac
gacggccgttctttaaaaacaattataccccaagtaaatcctcggaaactagtgcttatt
catgctacagatgaagaaagggaagacatgaaacgtacatgtagtgctcttagtgcgttt
actaaggacgtttaccttccgaagtacggagaggacatcaatgttagtatagacgtcaac
gcctttagtctcaagctttcagatgacttgattcgaaatctgatttggacaaaggtagga
aactgtgaggtttcacatatgctggcaaaaattgagaagccttcggaatcagaaatccaa
gattcagaagcaaacgaagaggatgcgaaacggaacgatgccgaaaaggaggcagatcat
cttcctgttcttaaccctgtgacattgcggtcagatttggctagagcgccacgtgctgct
cctctcctagtaggaaacaccaaactagctgaactccgcaaagcacttctagatcaagga
atatccgctgagcttaagggtgaaggtgttttattatgtggtggagtcgttgctgtaaga
aaacttagcggcggtaaaatctctattgaaggaggtttaagtaatcaattttttgaagtt
agaaagatggtatacaaaatgttggctatcgtttaa
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