Schizosaccharomyces osmophilus (fission yeast): SOMG_01395
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Entry
SOMG_01395 CDS
T09274
Symbol
cdc27
Name
(RefSeq) DNA polymerase delta subunit Cdc27
KO
K03504
DNA polymerase delta subunit 3
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03030
DNA replication
som03410
Base excision repair
som03420
Nucleotide excision repair
som03430
Mismatch repair
som03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOMG_01395 (cdc27)
03410 Base excision repair
SOMG_01395 (cdc27)
03420 Nucleotide excision repair
SOMG_01395 (cdc27)
03430 Mismatch repair
SOMG_01395 (cdc27)
03440 Homologous recombination
SOMG_01395 (cdc27)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
som01009
]
SOMG_01395 (cdc27)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
som03032
]
SOMG_01395 (cdc27)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_01395 (cdc27)
Protein phosphatases and associated proteins [BR:
som01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SOMG_01395 (cdc27)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
SOMG_01395 (cdc27)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
SOMG_01395 (cdc27)
MMR (mismatch excision repair)
DNA polymerase delta complex
SOMG_01395 (cdc27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
DUF1507
Motif
Other DBs
NCBI-GeneID:
80874877
NCBI-ProteinID:
XP_056036136
UniProt:
A0AAE9W9M0
LinkDB
All DBs
Position
1:join(3024931..3024984,3025035..3025090,3025135..3025369,3025415..3025522,3025568..3026266)
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AA seq
383 aa
AA seq
DB search
MEEWRKYLEINIINESSAVTETVLSLGLKISIQDAQSYLKVFYDENDQLYPVYIIHGVPK
DLGSLVDLDSGSDSLPSDFLTQYALATKASLLDICSQFEEGYKTQIYALSANPIVDFDEL
LPVIYKLRGKDVIYQKEHCEKYGFIHNENSKPRTLKTKTIPPSNKTPLPTIKKEPAEVDP
KKPKTCSSNLFRNVKPSNSRQNSTASKTSAGSENKPVPAGPTGKSELQTHQLKKENDDLR
NIMDMDDDHNSINEARKSAISVAASPEEVTSLDTESNKPSNENSTPEPEETITSIANGRK
HGKRKVTKTVTTHDDEGFLITKEEQAWESFSEDENENENENEKAKRAYPPKARASNPPTR
KKSGPQQGGNRQQKSIMSFFGKK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatggagaaaatatttagaaataaatatcataaacgaatcatcagcggtgacg
gagactgtgcttagtttaggtctaaagatatctatccaagatgctcaaagttatctgaaa
gtattttacgatgaaaatgatcaactttatccagtgtatattatccatggtgtgccaaaa
gacctgggttccttggtagatttggacagtgggtcagacagtttgccgtcagattttctt
acacaatacgctcttgcaacgaaggcttctctcttggacatttgcagtcaattcgaagag
ggatacaagactcaaatttatgctctatcagcaaatccaatcgtcgattttgatgagtta
ttgcccgtcatatacaaattacgaggcaaagatgttatataccaaaaagagcattgtgaa
aagtatggattcatacataatgaaaactcgaagccacgaaccttgaaaacgaaaacgata
ccaccctccaataaaacgcctcttcctactattaagaaagaacccgctgaagtggatcca
aagaaaccaaagacgtgctcttccaacctgttcagaaatgtgaaaccttcaaattcgcgg
cagaattctacggccagcaaaacgtcggcgggatctgagaataagcctgtgccggccggt
cctacaggaaaatcagaattacagacacatcagcttaaaaaggagaatgacgacttaaga
aatatcatggatatggacgatgatcataattcaatcaacgaagcaagaaaatcggcaatt
tctgtcgctgccagtccagaggaagtaaccagcttagatacagagtctaataagccttcg
aatgaaaattctactcctgaacccgaagaaactataacttcaatagccaacggacgaaaa
catggtaagcgtaaagttacaaaaacggtcactacccatgacgacgaaggattcttaatt
acaaaagaagaacaggcttgggaatcattctctgaggatgaaaatgaaaatgaaaatgaa
aatgaaaaggccaaacgggcttatcctccgaaggctagagcatcaaatccccctactcgt
aaaaaaagtggacctcagcagggtggaaatcgccagcagaaatctatcatgtcctttttt
ggaaagaagtaa
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