Schizosaccharomyces osmophilus (fission yeast): SOMG_01399
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Entry
SOMG_01399 CDS
T09274
Symbol
rpb4
Name
(RefSeq) DNA-directed RNA polymerase II complex subunit Rpb4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03020
RNA polymerase
som03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOMG_01399 (rpb4)
09124 Replication and repair
03420 Nucleotide excision repair
SOMG_01399 (rpb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01399 (rpb4)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_01399 (rpb4)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SOMG_01399 (rpb4)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SOMG_01399 (rpb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
80874881
NCBI-ProteinID:
XP_056036138
LinkDB
All DBs
Position
1:complement(join(3031717..3031888,3031948..3032025,3032079..3032184,3032236..3032287))
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AA seq
135 aa
AA seq
DB search
MPRAIFEEDATQLKLGPEFENEDMLTVSEAKILIDTVMAQRTREANGEIPLTDVMKKTLS
YFNVFGRFKTAESTYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSLSNKIDDESL
QGILDELSTLRKFQE
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgcctagagcaatttttgaagaagatgcgactcaactaaaattaggaccagagtttgaa
aatgaagatatgctcacagtttcggaggcaaaaattctgattgatactgtgatggcgcaa
aggacaagagaagcgaatggggaaattcctctgactgatgtcatgaagaagacgctttcc
tattttaatgtatttggaagattcaaaaccgcagagtctacatacgcttgcgaaagaatt
ttaggaaatcgctttcacaaatttgagcgtgctcagttgggaacactgtgttgtgaagat
gcagaagaagcgcggactctgattcccagtttgtctaataaaatcgatgatgagagttta
caagggattttggatgaattgtctacgttacgcaagttccaggaataa
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