Schizosaccharomyces osmophilus (fission yeast): SOMG_01418
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Entry
SOMG_01418 CDS
T09274
Symbol
fan1
Name
(RefSeq) DNA repair protein Fan1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SOMG_01418 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_01418 (fan1)
Enzymes [BR:
som01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
SOMG_01418 (fan1)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
SOMG_01418 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
DUF7440
CHDCT2
DUF7070
Motif
Other DBs
NCBI-GeneID:
80874900
NCBI-ProteinID:
XP_056034865
UniProt:
A0AAF0ATB4
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All DBs
Position
1:3069374..3071470
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AA seq
698 aa
AA seq
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MKRYFQEALGDEFSSGEYPANENQYYPKDSMSLAIDRPKKQFKASSTESSMYLLGFKQIL
STVLGHESHLLAQEELSVIDKFKILSCDEQYLFVRLFMRKRDKWFRVAQLNYPDCQNIAE
SCAGLRKSGFFVDDNSISIEELLEIMTSEELRTVARSSKIKGKSRKEVIDSIICLSRKQS
VLHTDGQLFLSFNGIGNLNNQTKQLKKQILYYSGSCVKPEKSVVELFHRIHVVYFRSTMY
DEHSLTSLILVRINKTVYPSYQISRTSNVFESRSVLMEYVDALELCKKVLPLFEGPMLSN
EEAFGTALDLFFNIYPKWLSYINCDMLKFANAFEEDKQHLYSFIFSYRPGAVYTYLIHKG
TNILGKLRLVDLEIEVLDTLLAQNMYLIGKRGFWYNRKALLEGNYRTTEVSMLRTWRHRA
LCTCTHGVEDKNTHMKYQFVLQRRLSRLEKVLMVPEKDRRDFSYNFQNKPSNITIYGKRK
DLKDKSQQRTLWLTSKGDVLTVEQFAAEYYTSLGWSTVHSESGIFLTLFALVFWDIIFMD
IPGVFQSAFQSAPLDLSTDLFFSAREFAIRERLAEVECGYTGQYVKDVYTRESESQPVCI
GLQWVYSLEMLLSVTHCIPGKGLASIFHAMAQDYKNASSGMPDLCLWNSNTKNFLLSEVK
SDNDRLSEPQKFWIDLLLSASLPVEVCHVLTDTDKISL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctattttcaggaggcattaggagatgaattttcaagcggtgaatacccagct
aatgaaaatcaatattatcctaaagactctatgagtttggcaattgatcgtccaaaaaaa
caattcaaggccagctcaactgaaagctcaatgtacttgttggggttcaaacaaatactt
tctacagttctcggccatgagtctcacctcttagctcaagaagagctatccgtaattgat
aaattcaagattctgtcatgcgacgagcaatatctctttgttcgtcttttcatgagaaag
cgcgataaatggtttcgagttgcacagctcaattatccagattgccagaatatagcagaa
tcttgtgcaggtcttagaaaatcggggttttttgttgatgacaattcaataagcattgag
gaattattggaaatcatgacttcagaggagctgcgaacggtagctcgttccagtaaaata
aaaggaaagtcgaggaaagaagtcattgactcaattatctgtttgtcgagaaaacaatct
gtgctccatactgatggtcaattgtttctttccttcaatggaataggaaacttgaataat
cagacgaagcagctcaaaaagcagattttatattacagcggatcatgtgtaaaaccggaa
aagagtgtcgttgagcttttccatcggatacacgtagtatactttcgttccacgatgtat
gatgaacattctctaacttctttgatcctagttcgaattaacaaaacggtatatccgagt
tatcaaatatctcgaacctcaaatgtcttcgaatctaggtcagttttgatggaatatgta
gatgcgctagagctttgtaaaaaagttttaccattatttgaaggtcctatgttgtcaaac
gaagaagcttttggaactgcccttgatcttttttttaatatttacccaaaatggctgtct
tacatcaattgtgatatgctaaagtttgcaaatgcttttgaggaagataagcaacatttg
tacagctttattttttcttatcgtccaggggctgtttatacttatttaattcataaaggt
acaaacattttaggaaaactacgtttagttgatcttgaaatcgaagtccttgatactcta
cttgctcaaaacatgtacttaattggtaaaagggggttttggtacaataggaaagcactt
ttggaaggaaattacagaactacagaagtaagtatgctacgcacttggcgacatcgagct
ctctgtacctgtacacatggcgttgaggacaaaaatacgcacatgaaatatcagtttgtt
cttcagagaagactttcgcgactcgaaaaagtattaatggtacccgaaaaggataggcgt
gatttttcttataactttcaaaacaaaccttcaaatattacaatatatggtaaaagaaag
gacttgaaggataaaagtcaacaaagaacgctttggcttacttcaaagggagatgtactg
acagtcgaacagtttgctgccgagtactatacatctcttggttggtctactgttcactct
gaaagcggaattttcctgactttgtttgctttggttttttgggatattatttttatggac
attcctggtgttttccaatccgcgtttcagtcagcacctttggatttatccacggatttg
tttttttcggcacgggaattcgcaattcgtgaaagacttgcagaagttgaatgcggctac
actggacaatatgtcaaggatgtttatactcgtgagtcggaaagtcagccagtatgcata
gggttgcaatgggtttattcgcttgagatgctgctttctgtaacacactgtatacctggt
aaaggcctagcttctatcttccatgccatggcccaagactataaaaatgcttccagtggt
atgccagatttatgcctttggaattctaatacaaaaaattttctactatcggaagtcaag
agtgataacgacagattgtccgagccccaaaagttttggattgatttattgttgagtgca
agcttacccgtagaagtatgtcatgtgctcacagatacagacaaaatttctttgtaa
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