Schizosaccharomyces osmophilus (fission yeast): SOMG_01430
Help
Entry
SOMG_01430 CDS
T09274
Symbol
air1
Name
(RefSeq) TRAMP complex zinc knuckle subunit Air1
KO
K12597
protein AIR1/2
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_01430 (air1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_01430 (air1)
03016 Transfer RNA biogenesis [BR:
som03016
]
SOMG_01430 (air1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
SOMG_01430 (air1)
Transfer RNA biogenesis [BR:
som03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
SOMG_01430 (air1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
TMEM106_N
AIR2-like_ZnK4
Sec61_beta
Motif
Other DBs
NCBI-GeneID:
80874912
NCBI-ProteinID:
XP_056035229
UniProt:
A0AAE9W8X3
LinkDB
All DBs
Position
1:join(3098553..3098774,3098825..3098926,3098970..3099584)
Genome browser
AA seq
312 aa
AA seq
DB search
MVVNEKSVSDDISDGEESSFMQKIFALPVDSKIQEAIPDEKPEEGENEEVNENDSSTELS
DSALDEVEGNEWADVSRGRYFGEDPSETILCHNCKGFGHIAKECPHTLCTTCGAIDDHIS
PRCPRTKRCINCGLLGHIAVRCPESRRKGPKRCLTCHTESHTSGTCPLIWRYYVESENGV
RVDPNEVKKFCYNCASGEHFGDDCPLPSRSSYPESTAFCEANCPTGNDVSNSVFNENRKI
ESGSKNRDFGKSRKNPKNTKQRSPSDLGSRIDLSERPKRKRYPANDKNEFSFRNHNGNAS
QKKQKKMKKNRW
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggttgtaaatgaaaaatcagtgtcggatgatatatcagatggtgaagaatcatcgttt
atgcaaaaaatatttgcattgccagtggactccaaaatccaagaggcaattccagatgag
aaaccagaagagggcgaaaatgaagaagtaaatgaaaatgactcgtccaccgaattatct
gatagcgcattggatgaagtagaaggcaatgaatgggccgatgttagcagaggccgttat
tttggagaagacccctcagaaaccattctttgtcacaattgtaaaggttttggacatatt
gcaaaagaatgtcctcacacattgtgtactacttgcggtgcaattgatgatcatatatct
ccacgctgcccgagaacaaaacgatgcataaattgcggtttattaggtcatattgctgtg
cgttgtcctgaatcacgtagaaaaggaccaaaaagatgcctaacgtgccatactgagtct
catacgagcgggacgtgtcccttgatttggagatactatgttgaatcagaaaacggtgtt
cgggtagatcccaatgaagtgaaaaagttttgctacaactgtgcgtccggtgaacatttt
ggtgatgattgccctcttccttctcgttctagctatcccgaaagcaccgctttctgtgaa
gcgaattgtcctacagggaatgatgtttcaaactctgtgttcaacgaaaaccggaaaata
gagagtgggtctaagaatcgagattttggtaaatccagaaagaacccaaaaaatacaaaa
caacgttctccaagtgatctgggctcgagaattgacctaagtgagagaccaaaaaggaag
cgttatcctgctaacgacaaaaatgaattttcatttcgcaatcataatggaaatgcttcg
caaaagaaacaaaaaaaaatgaagaaaaatagatggtaa
DBGET
integrated database retrieval system
