Schizosaccharomyces osmophilus (fission yeast): SOMG_01515
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Entry
SOMG_01515 CDS
T09274
Symbol
mcs2
Name
(RefSeq) transcription factor TFIIH complex cyclin Mcs2
KO
K06634
cyclin H
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03022
Basal transcription factors
som03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SOMG_01515 (mcs2)
09124 Replication and repair
03420 Nucleotide excision repair
SOMG_01515 (mcs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01515 (mcs2)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_01515 (mcs2)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SOMG_01515 (mcs2)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SOMG_01515 (mcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
80874997
NCBI-ProteinID:
XP_056034781
LinkDB
All DBs
Position
1:join(3292898..3293170,3293213..3293286,3293337..3293958)
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AA seq
322 aa
AA seq
DB search
MAEDRFRQSSHFRDWIFTEEGLQKRRIDVNQEFTKVVRQRLLEDLALQNKDASDNDLPPT
LDQNEEMELVNYYACQLNALSSTMSLPTHIRATATLFFKRFYLTSSVMEYNPKIISFTSL
YLATKTNDHYLPIEHFCKNLPKTTPDQVLEYEFNVCQALNWDLFIWLPFRPLQGFLLDFQ
VAIPETPVETLFECHDQTKRFLVETLHSDMYFYHSPSIIALSGIYHTNPSLCINYLQAKS
INSTHDLIVSISSALDSTKNARLDREKAKDCGKKLYFCMDPLKKKNSSLYLKRKAMEEET
SLGNKKQKLSNSTDQLDVNPFA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaccggtttcgtcaatcgagtcatttccgtgattggatttttacggaagag
ggattacagaaaagaaggatagatgttaatcaagaatttacaaaagttgttcgtcagcga
cttttagaagacttagctctccaaaataaagatgcttcagacaacgatttgccccctact
ctagatcaaaacgaagaaatggagctggttaattactatgcatgccagttaaatgctctt
tcgtcgacaatgtctttgcctactcacattcgtgctacagccacgcttttctttaagagg
ttttatctgaccagttctgttatggaatataacccaaaaattatttcatttacatcatta
tacctagcaacaaaaacgaatgaccattatctaccaatcgagcatttctgtaaaaatctt
ccaaaaactacacccgatcaagttctggagtatgaattcaatgtctgccaagctttgaat
tgggatttgtttatatggcttcctttccgaccgcttcaaggtttcctcttggactttcag
gttgctattcctgaaactccagtggaaaccttatttgaatgccatgaccagactaaaagg
tttctggtcgaaacattacactcagacatgtatttttatcattctccaagtatcattgcg
ctatctggaatttaccatacaaatccttctctttgtatcaattatttacaagcgaaatcc
atcaactcgacgcatgatttgattgtttctatctctagcgcgcttgattccaccaaaaat
gcaaggttggatcgagaaaaagctaaagactgtggaaaaaaactttacttttgtatggat
cccttaaaaaaaaagaacagctctttatatctaaaacggaaggccatggaggaagaaact
tcattaggtaataagaaacagaaattgagtaattcaaccgatcagctagacgtgaatcct
tttgcataa
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