Schizosaccharomyces osmophilus (fission yeast): SOMG_01591
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Entry
SOMG_01591 CDS
T09274
Symbol
snf5
Name
(RefSeq) SWI/SNF complex subunit Snf5
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03082
ATP-dependent chromatin remodeling
som03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SOMG_01591 (snf5)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SOMG_01591 (snf5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
som01009
]
SOMG_01591 (snf5)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01591 (snf5)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_01591 (snf5)
Protein phosphatases and associated proteins [BR:
som01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SOMG_01591 (snf5)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SOMG_01591 (snf5)
SWI/SNF complex
SOMG_01591 (snf5)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
SOMG_01591 (snf5)
PBAF complex
SOMG_01591 (snf5)
SWI/SNF complex
SOMG_01591 (snf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
80875073
NCBI-ProteinID:
XP_056035646
UniProt:
A0AAF0AUI1
LinkDB
All DBs
Position
1:3481402..3483150
Genome browser
AA seq
582 aa
AA seq
DB search
MDANLQHCLSSDQAYLSQISENQLETSISNTTLSRYQNARELLSLRSGSEAAISRFGIGY
AGFGNGWTSTKSKVVYPNQKKRVRGRYCYSFNRRTNGTQAELPVDLVPIRLEIDADRYKL
RESFTWNAYDKCIPLDVFAEQLCLDYDIPPNHMHMAQNISKSIQSQIHDYRPIRQALDSS
LQAKLDDSYQRRHPSFSEDGISIDESPQTYKEETNNGGTDLRFLVNLDITIGRLNLVDQF
EWDLFSSSGSAEEFASVMCFDLGLSGDFCTAISHSIREQSQMYLKSLVLIGYTFDGKEID
DEEIRSFMLPSLKEALRSNDMNAKSYSPMVYELSDAEMERQDRGYDREARRMRRRQGRAK
HGVALPDLNDIPKIHRTSYKNSSVPFDDDWNQTYADAIAQKQATLDYQAFMAPMKESLVL
SFKISPEKLKMSLDRSSGSSKLMPSFLPQAYPPNTSQLNYPAIQNELLNNSTVNPYYSSS
LASPKPTEVPTMTQTQGNPLPNFAPDWVKHCVEEINYKYPNEKFDLMVKHAENPAEQIFV
RIRCQYCANDIFSAGPGLSFGNFEIHLLSKTHQLNKESQMLL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaacttgcagcattgtctgtcgtctgatcaagcttatttatctcaaatatcg
gaaaatcaattagaaactagcatttctaataccacgctttctcgatatcagaatgcgcgt
gaattactgtccttgcgttcgggttcagaggcagcaataagtagatttggcattggctat
gcaggttttggaaatggatggacctctactaaatcaaaagttgtctaccctaaccaaaaa
aaaagagtgcgaggtcggtattgctattcattcaaccggaggacaaatgggacccaagct
gaattaccagtggatttagtaccaataagactggagattgatgcagatagatataaatta
agagaatcatttacctggaatgcatacgataaatgtattcctttagacgttttcgccgag
cagctatgtttagattatgacattcctccgaatcatatgcatatggcacagaatatatca
aaaagtatacagtcccaaattcatgattatcggcctattcgacaagctctcgattcatct
ttacaagccaaattggacgactcttaccaacggcggcatccttcattttcagaagatggg
atttctatagacgaatcaccgcagacatacaaagaagaaactaataacggtggcacggat
cttcgttttttggtgaatcttgatattacgataggacgtttaaacctcgtggatcaattc
gaatgggatttattttcatcatctggaagtgctgaggaatttgcttcagtcatgtgcttt
gaccttggtttaagtggagacttttgtaccgcaatttctcattctatccgagagcaatcg
caaatgtatttgaagtccctagtcttgatcggttatacatttgatggaaaagaaattgac
gatgaagaaatacgatcgtttatgttaccatctttaaaggaagcacttcgctcgaatgat
atgaatgcaaagtcctattcaccgatggtatatgaactatctgatgctgaaatggaacgt
caagaccgtggatacgatcgtgaagctagaaggatgagaagacgacaagggcgtgcaaag
catggtgtggctcttcctgatttaaatgacatcccaaaaatacatagaacgtcttataaa
aactcatcggttccttttgatgacgactggaaccaaacgtatgctgatgcaattgcacag
aagcaagcaacactcgactatcaagccttcatggctccaatgaaggaaagtttagtcctc
agctttaaaatatctccagaaaaactcaaaatgtctttggatcgttcctcaggctcttct
aaactcatgccttcattcttgccgcaagcatatccccctaacacttctcagcttaattat
cccgctattcagaatgaacttttaaataattctacagttaacccatattatagttcttct
ttggcttcgccaaaaccgactgaagttccaacgatgacccaaacacaaggaaacccctta
ccgaactttgccccagattgggtaaaacattgtgttgaagaaataaactacaaatatcct
aatgaaaagtttgatctcatggtaaaacatgctgagaatcctgctgagcagatttttgtg
cggattcgttgccaatactgcgctaatgatattttttcggctggtcctggattatctttt
ggaaactttgaaattcacttgctttctaagacgcaccagctaaataaagaatctcagatg
ctgctataa
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