Schizosaccharomyces osmophilus (fission yeast): SOMG_01614
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Entry
SOMG_01614 CDS
T09274
Symbol
rpa2
Name
(RefSeq) DNA-directed RNA polymerase I complex subunit Rpa2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOMG_01614 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01614 (rpa2)
Enzymes [BR:
som01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOMG_01614 (rpa2)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
SOMG_01614 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
80875096
NCBI-ProteinID:
XP_056037025
UniProt:
A0AAF0AVR9
LinkDB
All DBs
Position
1:complement(3534459..3537980)
Genome browser
AA seq
1173 aa
AA seq
DB search
MSFHTLEREKTFKCPPTDGTSFPDLQFATKPHVQSFNALTDAGLLNLAVKEIGEKTIFDS
LAQENGNLKFGNKLSFRVDEVQIAKPMLSSRERTSINRKVYPAEARERLTSYKSRLVLKL
SWSVNNGPRQTEMREVGMLPIMVRSNRCHLEGLPPGELIAHKEESEEMGGYFIVNGIEKL
IRMLILPKRNHPTALIRPSFANRGNSYSQYGLSIRCVRADESSLTNTLHYLNNGVTMFRF
HWRKNEYLIPSMMILKALVETSDKEVFEGIVGNDLDNTFLTDRVELMLRAYKSYGLYTQT
ETLQYLGSKFRVVLGVAEDLTDVEVGRFLIKKVVLVHLSEPRDKFRLLLFMIRKLYALVA
GECCADNPDSPQHQEILLGGFLYGQILKEKIEDWLNGIRTQINMDIRRNVPGIDFSDRKY
LTKVLSKVNNDIGSKLQYFLSTGNLISNTGLDLQQATGYTVVAEKLNFYRFLSHFRMVHR
GAFFAELKTTTVRKLLPEAWGFMCPVHTPDGAPCGLLNHLARKCDVITHASDVSSVPSLL
LSLGVDPPSTMVHDPDWVSVQLDGKIIGWCTHRLAAHVANVLRDLKIQYAAAERNGTLTE
KPKVPLDLEIGLVPPSHGGQFPGLYLFSNTARMIRPVKHIGSGELDLLGPFEQVYMDVAC
FPREIVPKISTHVEYSPTNVLSIVANMTPFSDFNQSPRNMYQCQMAKQTMGTPGTALRYR
TDNKLYRLQTGQTPVVRPKLHNTYGMDHYPNGTNAIVAVISYTGYDMEDAMILNKSAHER
GFGYGTVYKGESVDLGQKRRRGEPVVHHFGFAPGSNPRREWQQKVDADGLPYVGTMLEDG
DPMVAYYDETTGQNFVESYHGTEPGFVDEVRLIGNDVGDSECQQIHIKFRITRSPIIGDK
FSSRHGQKGICSQKWPAVDMPFTETGMQPDIIINPHAFPSRMTIGMFVESLAGKAGACQG
LAQDSTPFIFSEQQTASDYFGEQLVKSGYNYHGNEPMYSGITGKEMQADIYIGVVYYQRL
RHMVNDKFQVRTTGPIHNLTRQPIKGRKRAGGIRFGEMERDAVIGHGTSFLMQDRLMNCS
DYAQSWVCRDCGSIISPMSTISMSGSGASSEVKCRACAKPATGLEDANLTWEDGTGHKFV
GGSNTTLVALPSVFNYLTAELAAMNIKMMLDVK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccataccttagagcgagaaaagacattcaagtgtccgcctacggacggaact
agcttcccagatttgcaatttgctacgaagcctcatgtccagtcctttaatgcactaacg
gatgctggattgctgaaccttgcagtcaaggaaatcggcgaaaagacgatttttgactct
cttgcccaagaaaatggcaatctcaagtttggaaacaagctttcttttcgcgtggacgag
gttcaaattgcaaaacccatgttgtcaagcagagagcgtacctctatcaaccgtaaggtt
tatcctgctgaagcaagagagcgcttgacatcttacaaatcacgccttgtcctgaagcta
tcttggtccgtgaacaatggtccccgacaaaccgagatgcgtgaagtgggcatgttgcca
attatggtccgctcaaaccgttgtcatttagagggattgcctcccggtgaattgattgct
cataaagaagaaagtgaagaaatgggagggtattttatagtaaacggaattgaaaagctt
attcgtatgttgattctccccaagcgtaaccaccctaccgctcttatccgtccgtctttc
gccaatcgtggtaatagttatagccagtatggtctttccattcgttgcgttcgagccgac
gaatctagtttgacaaacactcttcattatctcaataatggtgtcactatgttccgtttc
cactggcgcaaaaacgaatatttgattccctccatgatgattctcaaagctttggtggaa
actagcgacaaagaggtttttgaaggtattgttggtaatgatttggataacactttctta
actgatcgtgtggaacttatgcttcgcgcatacaaatcctatggtctctatacacagact
gagactcttcagtatctcggtagcaaattccgcgtcgtccttggcgttgctgaagattta
accgacgtcgaagtaggtcgcttcctcattaaaaaggtagtattggttcacttgtccgaa
cctagggataagtttagacttctgttgtttatgattcgtaaattatatgctttggttgca
ggtgaatgttgtgctgataatccagattctcctcagcatcaggaaattcttcttggtggt
ttcttgtatggtcaaatcctgaaagaaaagatagaggattggctaaacggtattcgcact
caaattaatatggacattcgtcgtaatgttcctggtattgatttttctgatcgcaagtat
ttgactaaagttttatccaaagttaataatgatattggctcgaagcttcaatacttcttg
agtactggtaatctgatatctaacactggtcttgatttacaacaggctactggctatact
gttgtcgcagaaaaactaaacttttaccgttttctttcacacttccgaatggttcatcgt
ggtgctttctttgctgaacttaagacgaccaccgttcgtaaattactacctgaagcatgg
ggctttatgtgtcctgttcatactcctgatggtgcaccatgtggcttgctcaatcacttg
gctaggaagtgtgatgttatcactcatgcctcagatgtgagttccgttccttcacttttg
ttatcattgggtgtggatcctcctagtacgatggttcatgaccctgactgggtaagtgtt
cagttagatggtaaaatcattggctggtgtacgcatagattagctgcacatgttgccaac
gttttgcgggacttgaagattcaatatgctgctgctgaacgcaacggaactttgactgag
aagcccaaggtacccttggatttagaaatcggtttggtccctccttctcatggtggtcaa
ttccccggtttgtatttgtttagcaataccgctcgtatgatccgcccggtcaagcacatc
ggaagtggtgaattggatttgctcggtccatttgaacaagtctatatggatgttgcctgt
tttccgagagaaatcgttccaaagatttcaactcacgttgaatattctcctacaaatgta
ctttcaattgttgcaaacatgacccctttctctgactttaaccagtctccccgtaacatg
tatcaatgtcagatggctaagcaaacaatgggtactcctggaactgctttacgctatcgt
acagataacaagctatatcgcttgcaaaccggtcaaacacctgttgttcgtcccaagttg
cataatacatacggaatggatcactatcctaacggtactaatgcaatcgttgctgtcatc
tcttataccggttatgatatggaagatgcaatgattttgaataagtcagctcatgagcgt
ggtttcggttatggtaccgtttataaaggagaatctgtcgatttaggccaaaagcgtaga
cgtggtgagcctgttgtgcaccactttggatttgcccctggttctaatcctcgtcgtgaa
tggcagcagaaggttgatgctgatggtctcccatatgtcggtacaatgcttgaagatggc
gatcctatggttgcttactacgatgaaacaactggtcaaaacttcgtagaaagttatcat
ggtactgagcctggctttgtggatgaagtccgtctgattggtaatgatgttggtgattct
gaatgccagcagattcacatcaagttccgtattacccgcagtcccattattggtgataag
ttctcttctagacacggtcaaaagggtatttgctcccaaaaatggcctgctgttgacatg
ccttttactgaaactggtatgcagccagatattatcattaatcctcatgcattcccatcg
cgtatgacaatcggtatgtttgttgagagtttggctggtaaagctggtgcttgtcaaggt
cttgctcaagatagtacaccatttattttctctgagcaacaaacagcttcggactatttt
ggtgaacaattggtaaaatctggctataactatcacggaaatgagcccatgtacagtggt
attaccggtaaggaaatgcaggctgatatttatattggtgttgtttactaccaacgtctt
cgtcacatggtgaacgataaattccaggttcgtactaccggtcctattcataacctaaca
cgccagcctattaaaggtcgtaagcgtgctggtggtatccgtttcggtgaaatggaacgt
gatgctgttattggtcacggaacatcattcttgatgcaagatcgtttgatgaactgttca
gattatgctcagagttgggtttgtcgtgactgtggctctatcatctctcctatgtctacg
atttctatgagtggcagtggagcctcttcagaagttaaatgccgtgcttgtgctaaacca
gccactggtttagaagatgccaatttgacatgggaagatggtactggacacaaatttgtt
ggaggaagtaacactacccttgttgcacttcccagtgtgttcaattatcttaccgccgag
cttgcagctatgaacattaagatgatgctagacgtgaagtaa
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